RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 LINC00173Q6ZV60 143 aa4.99□□□□□ -1.61
NUP43-201ENST00000340413 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 NMUP48645 174 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 OR5A1Q8NGJ0 315 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 CDC42SE2Q9NRR3 84 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 UQCR10Q9UDW1 63 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 FGF6P10767 208 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 HIGD1BQ9P298 99 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 IGLV4-69A0A075B6H9 119 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 A0A096LPF7 62 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 TRAV8-6A0A0B4J262 113 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 A0A0J9YWU9 116 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 E9PLD3 99 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 UBE2D1P51668 147 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 NBEAL2Q6ZNJ1 2754 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 FAM104AQ969W3 186 aa4.98□□□□□ -1.61
NUP43-201ENST00000340413 H3BRM9 83 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 PLEKHB2Q96CS7 222 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 MIEN1Q9BRT3 115 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 F5H768 121 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 COX8AP10176 69 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 MRPS16Q9Y3D3 137 aaKnown RBP4.97□□□□□ -1.61
NUP43-201ENST00000340413 EMP1P54849 157 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 SPATA45Q537H7 98 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 TAL2Q16559 108 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 MUC7Q8TAX7 377 aa4.97□□□□□ -1.61
NUP43-201ENST00000340413 FBN1P35555 2871 aaKnown RBP4.96□□□□□ -1.61
NUP43-201ENST00000340413 DEFB131BA0A096LNP1 70 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 TRAV8-4A0A0B4J246 113 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 NUPR2A6NF83 97 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 LEPROTO15243 131 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 AMMECR1LQ6DCA0 310 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
NUP43-201ENST00000340413 RPL39P62891 51 aaKnown RBP4.96□□□□□ -1.62
NUP43-201ENST00000340413 TMEM223A0PJW6 202 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
NUP43-201ENST00000340413 LYPD5Q6UWN5 251 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 RETNQ9HD89 108 aa4.96□□□□□ -1.62
NUP43-201ENST00000340413 PRR34Q9NV39 138 aa4.95□□□□□ -1.62
NUP43-201ENST00000340413 TIMM17BO60830 172 aa4.95□□□□□ -1.62
NUP43-201ENST00000340413 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
NUP43-201ENST00000340413 PHLDA1Q8WV24 401 aaPredicted RBP4.95□□□□□ -1.62
NUP43-201ENST00000340413 TENM1Q9UKZ4 2725 aa4.95□□□□□ -1.62
NUP43-201ENST00000340413 Q6ZTC4 211 aa4.95□□□□□ -1.62
NUP43-201ENST00000340413 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 A0A0J9YXY3 114 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 DNAH10OSP0CZ25 163 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 SLC25A34Q6PIV7 304 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 LOC100131303A0A0U1RQF7 123 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
NUP43-201ENST00000340413 C4orf48Q5BLP8 95 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 Q6ZUT4 128 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 Q6ZVH6 145 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 CHAC1Q9BUX1 264 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 KLK5Q9Y337 293 aaPredicted RBP4.94□□□□□ -1.62
NUP43-201ENST00000340413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.94□□□□□ -1.62
NUP43-201ENST00000340413 IGKV2-29A2NJV5 120 aaPredicted RBP4.94□□□□□ -1.62
NUP43-201ENST00000340413 SS18Q15532 418 aa4.94□□□□□ -1.62
NUP43-201ENST00000340413 C10orf126Q8N4M7 172 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 CHCHD5Q9BSY4 110 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 IGHV1-58A0A0C4DH39 117 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 LINC00587B1AMM8 73 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 DDTP30046 118 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 SPANXB1Q9NS25 103 aaPredicted RBP4.93□□□□□ -1.62
NUP43-201ENST00000340413 Q9UF83 564 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 DYNC2H1Q8NCM8 4307 aaKnown RBP4.93□□□□□ -1.62
NUP43-201ENST00000340413 IGHV3-38A0A0C4DH36 116 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 CXCL5P42830 114 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 RBX1P62877 108 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 HERV-K104P63124 156 aa4.93□□□□□ -1.62
NUP43-201ENST00000340413 MIAQ16674 131 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 ZC2HC1BQ5TFG8 222 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 CEMP1Q6PRD7 247 aaPredicted RBP4.92□□□□□ -1.62
NUP43-201ENST00000340413 COPS9Q8WXC6 57 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 NANOS2P60321 138 aaKnown RBP4.92□□□□□ -1.62
NUP43-201ENST00000340413 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 GEMIN7Q9H840 131 aaKnown RBP4.92□□□□□ -1.62
NUP43-201ENST00000340413 A0A087WZ39 114 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 RMI2Q96E14 147 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 COX11Q9Y6N1 276 aa4.92□□□□□ -1.62
NUP43-201ENST00000340413 DEFB4AO15263 64 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 CD164L2Q6UWJ8 174 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 VWFP04275 2813 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 LINC00959A0A1B0GUT2 108 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 PTTG1IPP53801 180 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 ZFAND6Q6FIF0 208 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 TP73-AS1Q9UF72 201 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 PAM16Q9Y3D7 125 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 M0R143 59 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 CCL18P55774 89 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 GAGE6Q13070 117 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
NUP43-201ENST00000340413 NDUFA1O15239 70 aa4.9□□□□□ -1.62
NUP43-201ENST00000340413 CDPF1Q6NVV7 123 aa4.9□□□□□ -1.62
NUP43-201ENST00000340413 APLNQ9ULZ1 77 aa4.9□□□□□ -1.62
NUP43-201ENST00000340413 hDV102S1A0JD36 115 aa4.9□□□□□ -1.63
NUP43-201ENST00000340413 HSD52Q0P140 79 aa4.9□□□□□ -1.63
NUP43-201ENST00000340413 IGHV3OR16-9A0A0B4J2B5 98 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms