RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 RPL39LQ96EH5 51 aaKnown RBP8.88□□□□□ -0.99
COMMD4-202ENST00000338995 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
COMMD4-202ENST00000338995 A8MWL6 223 aa8.87□□□□□ -0.99
COMMD4-202ENST00000338995 CCL25O15444 150 aa8.87□□□□□ -0.99
COMMD4-202ENST00000338995 SRSF3P84103 164 aaKnown RBP8.87□□□□□ -0.99
COMMD4-202ENST00000338995 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
COMMD4-202ENST00000338995 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
COMMD4-202ENST00000338995 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
COMMD4-202ENST00000338995 RNASE7Q9H1E1 156 aaKnown RBP8.87□□□□□ -0.99
COMMD4-202ENST00000338995 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 UQCC3Q6UW78 93 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 CD164L2Q6UWJ8 174 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 MRAP2Q96G30 205 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 SMDT1Q9H4I9 107 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 ST20Q9HBF5 79 aa8.86□□□□□ -0.99
COMMD4-202ENST00000338995 TRBV6-5A0A0K0K1A5 114 aa8.85□□□□□ -0.99
COMMD4-202ENST00000338995 GATCO43716 136 aaKnown RBP8.85□□□□□ -0.99
COMMD4-202ENST00000338995 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
COMMD4-202ENST00000338995 MALP21145 153 aa8.85□□□□□ -0.99
COMMD4-202ENST00000338995 CEBPGP53567 150 aa8.85□□□□□ -0.99
COMMD4-202ENST00000338995 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
COMMD4-202ENST00000338995 SLC7A5P1Q8MH63 180 aa8.85□□□□□ -0.99
COMMD4-202ENST00000338995 LRP2P98164 4655 aa8.84□□□□□ -0.99
COMMD4-202ENST00000338995 LOC107984640A0A0U1RRK4 108 aa8.84□□□□□ -0.99
COMMD4-202ENST00000338995 C9JQL5 133 aa8.84□□□□□ -0.99
COMMD4-202ENST00000338995 TMEM250H0YL14 139 aa8.84□□□□□ -0.99
COMMD4-202ENST00000338995 FAM231BA6NCW3 169 aa8.83□□□□□ -1
COMMD4-202ENST00000338995 ESDP10768 282 aa8.83□□□□□ -1
COMMD4-202ENST00000338995 FOXA3P55318 350 aaPredicted RBP8.83□□□□□ -1
COMMD4-202ENST00000338995 GAGE2BQ13066 116 aa8.83□□□□□ -1
COMMD4-202ENST00000338995 ZNF664Q8N3J9 261 aa8.83□□□□□ -1
COMMD4-202ENST00000338995 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
COMMD4-202ENST00000338995 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
COMMD4-202ENST00000338995 C1orf196B1AJZ1 125 aa8.82□□□□□ -1
COMMD4-202ENST00000338995 CAMPP49913 170 aa8.82□□□□□ -1
COMMD4-202ENST00000338995 PTTG1IPP53801 180 aa8.82□□□□□ -1
COMMD4-202ENST00000338995 MRPL52Q86TS9 123 aaKnown RBP8.82□□□□□ -1
COMMD4-202ENST00000338995 K7EN84 100 aa8.81□□□□□ -1
COMMD4-202ENST00000338995 COX7A2LO14548 114 aa8.81□□□□□ -1
COMMD4-202ENST00000338995 FAM231DQ6ZW35 169 aa8.81□□□□□ -1
COMMD4-202ENST00000338995 TMEM242Q9NWH2 141 aa8.81□□□□□ -1
COMMD4-202ENST00000338995 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 TMEM218A2RU14 115 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 C7orf77A4D0Y5 90 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 VCYO14598 125 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 APOMO95445 188 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 PPP1R17O96001 155 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 TSHBP01222 138 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 MT-ND6P03923 174 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 FCER1GP30273 86 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 CT83Q5H943 113 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 SMIM7Q9BQ49 75 aa8.8□□□□□ -1
COMMD4-202ENST00000338995 TRBV27A0A0K0K1C4 114 aa8.79□□□□□ -1
COMMD4-202ENST00000338995 A0A1B0GUT8 65 aa8.79□□□□□ -1
COMMD4-202ENST00000338995 ZNF727A8MUV8 499 aa8.79□□□□□ -1
COMMD4-202ENST00000338995 POLR2KP53803 58 aaKnown RBP8.79□□□□□ -1
COMMD4-202ENST00000338995 ODF1Q14990 250 aa8.79□□□□□ -1
COMMD4-202ENST00000338995 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
COMMD4-202ENST00000338995 TMEM191AQ9H0A3 160 aa8.79□□□□□ -1
COMMD4-202ENST00000338995 FAM74A3Q4VXF1 159 aa8.78□□□□□ -1
COMMD4-202ENST00000338995 TMEM18Q96B42 140 aa8.78□□□□□ -1
COMMD4-202ENST00000338995 C2orf48Q96LS8 159 aa8.78□□□□□ -1
COMMD4-202ENST00000338995 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
COMMD4-202ENST00000338995 TNXBP22105 4242 aa8.78□□□□□ -1
COMMD4-202ENST00000338995 F8W036 122 aa8.77□□□□□ -1.01
COMMD4-202ENST00000338995 NUP35Q8NFH5 326 aa8.77□□□□□ -1.01
COMMD4-202ENST00000338995 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
COMMD4-202ENST00000338995 KIR2DL4Q99706 377 aa8.77□□□□□ -1.01
COMMD4-202ENST00000338995 ADCYAP1P18509 176 aa8.76□□□□□ -1.01
COMMD4-202ENST00000338995 RAB4AP20338 218 aa8.76□□□□□ -1.01
COMMD4-202ENST00000338995 TMEM241Q24JQ0 296 aa8.76□□□□□ -1.01
COMMD4-202ENST00000338995 SEC11CQ9BY50 192 aa8.76□□□□□ -1.01
COMMD4-202ENST00000338995 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
COMMD4-202ENST00000338995 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
COMMD4-202ENST00000338995 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
COMMD4-202ENST00000338995 RIGQ13278 110 aa8.75□□□□□ -1.01
COMMD4-202ENST00000338995 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
COMMD4-202ENST00000338995 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
COMMD4-202ENST00000338995 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
COMMD4-202ENST00000338995 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 F8WDY8 70 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 PPP1R2P9O14990 202 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 RPL18AQ02543 176 aaKnown RBP8.74□□□□□ -1.01
COMMD4-202ENST00000338995 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 DIRC1Q969H9 104 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 IMMP2LQ96T52 175 aa8.74□□□□□ -1.01
COMMD4-202ENST00000338995 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
COMMD4-202ENST00000338995 ATP6V1G1O75348 118 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 GAS8-AS1O95177 125 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
COMMD4-202ENST00000338995 ADIRFQ15847 76 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 C10orf91Q5T1B1 145 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 LINC01551Q86U37 167 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
COMMD4-202ENST00000338995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.72□□□□□ -1.01
COMMD4-202ENST00000338995 TCAPO15273 167 aa8.72□□□□□ -1.01
COMMD4-202ENST00000338995 RPL23P62829 140 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms