RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PRKDCP78527 4128 aaKnown RBP16.37■□□□□ 0.21
TSEN54-201ENST00000333213 A0A0J9YWU9 116 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 TRBV6-4A0A1B0GX49 114 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 PHLDA1Q8WV24 401 aaPredicted RBP16.37■□□□□ 0.21
TSEN54-201ENST00000333213 LOC100131303A0A0U1RQF7 123 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 LINC01549A6NIU2 74 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 VCYO14598 125 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 COTL1Q14019 142 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 RAB37Q96AX2 223 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 TNFRSF18Q9Y5U5 241 aa16.37■□□□□ 0.21
TSEN54-201ENST00000333213 C12orf74Q32Q52 190 aa16.35■□□□□ 0.21
TSEN54-201ENST00000333213 TRBV10-1A0A0K0K1A3 114 aa16.35■□□□□ 0.21
TSEN54-201ENST00000333213 ZNRF2Q8NHG8 242 aa16.35■□□□□ 0.21
TSEN54-201ENST00000333213 DNAJC30Q96LL9 226 aa16.35■□□□□ 0.21
TSEN54-201ENST00000333213 TRBV7-3A0A075B6L6 115 aa16.33■□□□□ 0.21
TSEN54-201ENST00000333213 SCGB3A1Q96QR1 104 aa16.33■□□□□ 0.2
TSEN54-201ENST00000333213 TTTY13Q9BZ97 58 aa16.33■□□□□ 0.2
TSEN54-201ENST00000333213 IGHV3-38A0A0C4DH36 116 aa16.32■□□□□ 0.2
TSEN54-201ENST00000333213 I3L3M4 83 aa16.32■□□□□ 0.2
TSEN54-201ENST00000333213 TSHBP01222 138 aa16.32■□□□□ 0.2
TSEN54-201ENST00000333213 CRYBA4P53673 196 aa16.32■□□□□ 0.2
TSEN54-201ENST00000333213 CHTOPQ9Y3Y2 248 aaKnown RBP16.32■□□□□ 0.2
TSEN54-201ENST00000333213 GAGE12JA6NER3 117 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 ATP5G1P05496 136 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 GAGE4Q13068 117 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 GAGE5Q13069 117 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 RHOHQ15669 191 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 GAGE13Q4V321 117 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 KIR2DL4Q99706 377 aa16.31■□□□□ 0.2
TSEN54-201ENST00000333213 NAA38Q9BRA0 125 aaKnown RBP16.31■□□□□ 0.2
TSEN54-201ENST00000333213 TEX48A0A1B0GUV7 120 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 E9PLD3 99 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 UBE2D3P61077 147 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 UBE2D2P62837 147 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 RPL36AP83881 106 aaKnown RBP16.3■□□□□ 0.2
TSEN54-201ENST00000333213 MAPKAPK5-AS1Q8N8E1 139 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 RPL36ALQ969Q0 106 aaKnown RBP16.3■□□□□ 0.2
TSEN54-201ENST00000333213 B9D2Q9BPU9 175 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 PRO0255Q9UI72 69 aa16.3■□□□□ 0.2
TSEN54-201ENST00000333213 VSIG2Q96IQ7 327 aa16.29■□□□□ 0.2
TSEN54-201ENST00000333213 NHP2Q9NX24 153 aaKnown RBP16.29■□□□□ 0.2
TSEN54-201ENST00000333213 A0A1B0GWB2 263 aa16.28■□□□□ 0.2
TSEN54-201ENST00000333213 MYMXA0A1B0GTQ4 84 aa16.27■□□□□ 0.2
TSEN54-201ENST00000333213 LINC00694P0DN24 101 aa16.27■□□□□ 0.2
TSEN54-201ENST00000333213 C2orf66Q6UXQ4 117 aa16.27■□□□□ 0.2
TSEN54-201ENST00000333213 Q6ZTC4 211 aa16.27■□□□□ 0.2
TSEN54-201ENST00000333213 PRADC1Q9BSG0 188 aa16.27■□□□□ 0.2
TSEN54-201ENST00000333213 HTN3P15516 51 aa16.27■□□□□ 0.19
TSEN54-201ENST00000333213 IGLL5B9A064 214 aa16.26■□□□□ 0.19
TSEN54-201ENST00000333213 F5H768 121 aa16.26■□□□□ 0.19
TSEN54-201ENST00000333213 NANOS2P60321 138 aaKnown RBP16.26■□□□□ 0.19
TSEN54-201ENST00000333213 BAALCQ8WXS3 180 aa16.26■□□□□ 0.19
TSEN54-201ENST00000333213 A0A0J9YY99 117 aa16.25■□□□□ 0.19
TSEN54-201ENST00000333213 GYPEP15421 78 aa16.25■□□□□ 0.19
TSEN54-201ENST00000333213 PAPPA-AS1Q5QFB9 102 aa16.25■□□□□ 0.19
TSEN54-201ENST00000333213 C11orf45Q8TAV5 145 aa16.25■□□□□ 0.19
TSEN54-201ENST00000333213 TRAV26-1A0A087WT03 109 aa16.24■□□□□ 0.19
TSEN54-201ENST00000333213 PAX4O43316 350 aa16.24■□□□□ 0.19
TSEN54-201ENST00000333213 RPL39P62891 51 aaKnown RBP16.24■□□□□ 0.19
TSEN54-201ENST00000333213 HIST1H4GQ99525 98 aa16.24■□□□□ 0.19
TSEN54-201ENST00000333213 K7ERJ3 54 aa16.23■□□□□ 0.19
TSEN54-201ENST00000333213 NTM-AS1Q6ZSK4 140 aa16.23■□□□□ 0.19
TSEN54-201ENST00000333213 F8W1H4 67 aa16.23■□□□□ 0.19
TSEN54-201ENST00000333213 DAZ4Q86SG3 579 aaKnown RBP16.23■□□□□ 0.19
TSEN54-201ENST00000333213 DAZ3Q9NR90 486 aaKnown RBP16.23■□□□□ 0.19
TSEN54-201ENST00000333213 CHCHD7Q9BUK0 85 aa16.22■□□□□ 0.19
TSEN54-201ENST00000333213 CYSLTR1Q9Y271 337 aa16.21■□□□□ 0.19
TSEN54-201ENST00000333213 PRSS29PA6NIE9 313 aa16.21■□□□□ 0.19
TSEN54-201ENST00000333213 C20orf203Q8NBC4 194 aa16.21■□□□□ 0.19
TSEN54-201ENST00000333213 TMEM141Q96I45 108 aa16.19■□□□□ 0.18
TSEN54-201ENST00000333213 STAB2Q8WWQ8 2551 aa16.18■□□□□ 0.18
TSEN54-201ENST00000333213 A0A096LPF7 62 aa16.17■□□□□ 0.18
TSEN54-201ENST00000333213 TMEM238LA0A1B0GVL6 79 aa16.17■□□□□ 0.18
TSEN54-201ENST00000333213 A6NJY4 79 aa16.17■□□□□ 0.18
TSEN54-201ENST00000333213 TIMM17AQ99595 171 aa16.17■□□□□ 0.18
TSEN54-201ENST00000333213 IGIPA6NJ69 53 aa16.17■□□□□ 0.18
TSEN54-201ENST00000333213 HERVK_113P61574 105 aa16.16■□□□□ 0.18
TSEN54-201ENST00000333213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.15■□□□□ 0.18
TSEN54-201ENST00000333213 IGKV2-29A2NJV5 120 aaPredicted RBP16.15■□□□□ 0.18
TSEN54-201ENST00000333213 ATP6V0E2Q8NHE4 81 aa16.15■□□□□ 0.18
TSEN54-201ENST00000333213 GTSF1LQ9H1H1 148 aa16.15■□□□□ 0.18
TSEN54-201ENST00000333213 PMVKQ15126 192 aa16.15■□□□□ 0.18
TSEN54-201ENST00000333213 DEFB131BA0A096LNP1 70 aa16.13■□□□□ 0.17
TSEN54-201ENST00000333213 ZNF815PA8K554 130 aa16.13■□□□□ 0.17
TSEN54-201ENST00000333213 J3QR89 54 aa16.13■□□□□ 0.17
TSEN54-201ENST00000333213 CEMP1Q6PRD7 247 aaPredicted RBP16.13■□□□□ 0.17
TSEN54-201ENST00000333213 FAM104AQ969W3 186 aa16.13■□□□□ 0.17
TSEN54-201ENST00000333213 IGLV4-69A0A075B6H9 119 aa16.12■□□□□ 0.17
TSEN54-201ENST00000333213 OPRPNQ99935 248 aaPredicted RBP16.12■□□□□ 0.17
TSEN54-201ENST00000333213 TRBV6-8A0A0A6YYG3 113 aa16.11■□□□□ 0.17
TSEN54-201ENST00000333213 NHLRC4P0CG21 123 aaPredicted RBP16.11■□□□□ 0.17
TSEN54-201ENST00000333213 RPL24P83731 157 aaKnown RBP16.11■□□□□ 0.17
TSEN54-201ENST00000333213 SPANXB1Q9NS25 103 aaPredicted RBP16.11■□□□□ 0.17
TSEN54-201ENST00000333213 UBE2D4Q9Y2X8 147 aa16.11■□□□□ 0.17
TSEN54-201ENST00000333213 C11orf86A6NJI1 115 aa16.1■□□□□ 0.17
TSEN54-201ENST00000333213 UBE2D1P51668 147 aa16.1■□□□□ 0.17
TSEN54-201ENST00000333213 MRPL23Q16540 153 aaKnown RBP16.09■□□□□ 0.17
TSEN54-201ENST00000333213 H3BNG1 76 aa16.09■□□□□ 0.17
TSEN54-201ENST00000333213 ICOSQ9Y6W8 199 aa16.09■□□□□ 0.17
TSEN54-201ENST00000333213 FBN3Q75N90 2809 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms