RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 ODF1Q14990 250 aa15.64■□□□□ 0.09
PPP4R4-202ENST00000328839 FAM231DQ6ZW35 169 aa15.64■□□□□ 0.09
PPP4R4-202ENST00000328839 TMEM250H0YL14 139 aa15.63■□□□□ 0.09
PPP4R4-202ENST00000328839 ZNF561-AS1K7EIQ3 104 aa15.63■□□□□ 0.09
PPP4R4-202ENST00000328839 ESDP10768 282 aa15.63■□□□□ 0.09
PPP4R4-202ENST00000328839 SYCNQ0VAF6 134 aa15.61■□□□□ 0.09
PPP4R4-202ENST00000328839 CT83Q5H943 113 aa15.6■□□□□ 0.09
PPP4R4-202ENST00000328839 REG3GQ6UW15 175 aa15.6■□□□□ 0.09
PPP4R4-202ENST00000328839 CD164L2Q6UWJ8 174 aa15.6■□□□□ 0.09
PPP4R4-202ENST00000328839 SPINK6Q6UWN8 80 aa15.6■□□□□ 0.09
PPP4R4-202ENST00000328839 CDC42SE2Q9NRR3 84 aa15.6■□□□□ 0.09
PPP4R4-202ENST00000328839 ZNF664Q8N3J9 261 aa15.59■□□□□ 0.09
PPP4R4-202ENST00000328839 A0A0J9YXV3 536 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 A0A1B0GUT8 65 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 C7orf77A4D0Y5 90 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 HIGD1CA8MV81 97 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 BLOC1S1P78537 153 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 ALKAL2Q6UX46 152 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 MRPL52Q86TS9 123 aaKnown RBP15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 TMEM191AQ9H0A3 160 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 LRP2P98164 4655 aa15.58■□□□□ 0.08
PPP4R4-202ENST00000328839 CAMPP49913 170 aa15.57■□□□□ 0.08
PPP4R4-202ENST00000328839 Q6ZRP5 223 aa15.57■□□□□ 0.08
PPP4R4-202ENST00000328839 FAM210AQ96ND0 272 aa15.57■□□□□ 0.08
PPP4R4-202ENST00000328839 RAB4AP20338 218 aa15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 MALP21145 153 aa15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 POLR2KP53803 58 aaKnown RBP15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 GAGE2BQ13066 116 aa15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 AMN1Q8IY45 258 aa15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 TSKUQ8WUA8 353 aa15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 ISOC2Q96AB3 205 aa15.56■□□□□ 0.08
PPP4R4-202ENST00000328839 TRBV27A0A0K0K1C4 114 aa15.55■□□□□ 0.08
PPP4R4-202ENST00000328839 FCER1GP30273 86 aa15.55■□□□□ 0.08
PPP4R4-202ENST00000328839 PTTG1IPP53801 180 aa15.55■□□□□ 0.08
PPP4R4-202ENST00000328839 SMIM7Q9BQ49 75 aa15.55■□□□□ 0.08
PPP4R4-202ENST00000328839 IGLV4-69A0A075B6H9 119 aa15.54■□□□□ 0.08
PPP4R4-202ENST00000328839 LOC107984640A0A0U1RRK4 108 aa15.54■□□□□ 0.08
PPP4R4-202ENST00000328839 SMKR1H3BMG3 65 aa15.53■□□□□ 0.08
PPP4R4-202ENST00000328839 EIF5A2Q9GZV4 153 aaKnown RBP15.53■□□□□ 0.08
PPP4R4-202ENST00000328839 C1orf196B1AJZ1 125 aa15.52■□□□□ 0.08
PPP4R4-202ENST00000328839 COX7A2LO14548 114 aa15.52■□□□□ 0.08
PPP4R4-202ENST00000328839 RNASE13Q5GAN3 156 aaKnown RBP15.52■□□□□ 0.08
PPP4R4-202ENST00000328839 LINC01551Q86U37 167 aa15.52■□□□□ 0.08
PPP4R4-202ENST00000328839 CAMK2N2Q96S95 79 aa15.51■□□□□ 0.07
PPP4R4-202ENST00000328839 RNF213Q63HN8 5207 aa15.51■□□□□ 0.07
PPP4R4-202ENST00000328839 VCYO14598 125 aa15.5■□□□□ 0.07
PPP4R4-202ENST00000328839 KRTAP10-8P60410 259 aa15.5■□□□□ 0.07
PPP4R4-202ENST00000328839 SRSF9Q13242 221 aaKnown RBP eCLIP15.5■□□□□ 0.07
PPP4R4-202ENST00000328839 TRAV13-1A0A0B4J241 112 aa15.49■□□□□ 0.07
PPP4R4-202ENST00000328839 ZNF727A8MUV8 499 aa15.49■□□□□ 0.07
PPP4R4-202ENST00000328839 SMAGPQ0VAQ4 97 aa15.49■□□□□ 0.07
PPP4R4-202ENST00000328839 OSTCQ9NRP0 149 aa15.49■□□□□ 0.07
PPP4R4-202ENST00000328839 RIGQ13278 110 aa15.48■□□□□ 0.07
PPP4R4-202ENST00000328839 NUP35Q8NFH5 326 aa15.48■□□□□ 0.07
PPP4R4-202ENST00000328839 KIR2DL4Q99706 377 aa15.48■□□□□ 0.07
PPP4R4-202ENST00000328839 UBE2D4Q9Y2X8 147 aa15.48■□□□□ 0.07
PPP4R4-202ENST00000328839 SUMO2P61956 95 aaKnown RBP15.47■□□□□ 0.07
PPP4R4-202ENST00000328839 A0A1W2PNN7 141 aa15.46■□□□□ 0.07
PPP4R4-202ENST00000328839 APOMO95445 188 aa15.46■□□□□ 0.07
PPP4R4-202ENST00000328839 PPP1R17O96001 155 aa15.46■□□□□ 0.07
PPP4R4-202ENST00000328839 RPL18AQ02543 176 aaKnown RBP15.46■□□□□ 0.07
PPP4R4-202ENST00000328839 C5orf38Q86SI9 138 aa15.46■□□□□ 0.07
PPP4R4-202ENST00000328839 CSDC2Q9Y534 153 aaKnown RBP15.46■□□□□ 0.07
PPP4R4-202ENST00000328839 AKAP14Q86UN6 197 aa15.45■□□□□ 0.06
PPP4R4-202ENST00000328839 NRACQ8N912 160 aa15.45■□□□□ 0.06
PPP4R4-202ENST00000328839 Q6ZUT4 128 aa15.44■□□□□ 0.06
PPP4R4-202ENST00000328839 V9GYV3 84 aa15.44■□□□□ 0.06
PPP4R4-202ENST00000328839 MT-ND6P03923 174 aa15.43■□□□□ 0.06
PPP4R4-202ENST00000328839 C9orf116Q5BN46 136 aaPredicted RBP15.43■□□□□ 0.06
PPP4R4-202ENST00000328839 C2orf48Q96LS8 159 aa15.43■□□□□ 0.06
PPP4R4-202ENST00000328839 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.42■□□□□ 0.06
PPP4R4-202ENST00000328839 PPP1R2P9O14990 202 aa15.42■□□□□ 0.06
PPP4R4-202ENST00000328839 SPAG11BQ08648 103 aa15.42■□□□□ 0.06
PPP4R4-202ENST00000328839 TMEM18Q96B42 140 aa15.42■□□□□ 0.06
PPP4R4-202ENST00000328839 OPRPNQ99935 248 aaPredicted RBP15.42■□□□□ 0.06
PPP4R4-202ENST00000328839 SRP19P09132 144 aaKnown RBP15.41■□□□□ 0.06
PPP4R4-202ENST00000328839 PSORS1C2Q9UIG4 136 aa15.41■□□□□ 0.06
PPP4R4-202ENST00000328839 MRPL51Q4U2R6 128 aaKnown RBP15.4■□□□□ 0.06
PPP4R4-202ENST00000328839 NAT8BQ9UHF3 227 aa15.4■□□□□ 0.06
PPP4R4-202ENST00000328839 hCG_2014768A0A024R1R8 64 aa15.39■□□□□ 0.05
PPP4R4-202ENST00000328839 C1orf137Q5JT78 98 aa15.38■□□□□ 0.05
PPP4R4-202ENST00000328839 PHF5AQ7RTV0 110 aaKnown RBP15.38■□□□□ 0.05
PPP4R4-202ENST00000328839 TIMM21Q9BVV7 248 aa15.38■□□□□ 0.05
PPP4R4-202ENST00000328839 FAM104BQ5XKR9 115 aa15.37■□□□□ 0.05
PPP4R4-202ENST00000328839 TMEM241Q24JQ0 296 aa15.36■□□□□ 0.05
PPP4R4-202ENST00000328839 RPL39P62891 51 aaKnown RBP15.35■□□□□ 0.05
PPP4R4-202ENST00000328839 ADIRFQ15847 76 aa15.35■□□□□ 0.05
PPP4R4-202ENST00000328839 OR10D4PQ8NGN7 298 aa15.35■□□□□ 0.05
PPP4R4-202ENST00000328839 ORAOV1Q8WV07 137 aa15.35■□□□□ 0.05
PPP4R4-202ENST00000328839 CKS2P33552 79 aa15.34■□□□□ 0.05
PPP4R4-202ENST00000328839 RPL23P62829 140 aaKnown RBP15.34■□□□□ 0.05
PPP4R4-202ENST00000328839 RNF151Q2KHN1 245 aa15.34■□□□□ 0.05
PPP4R4-202ENST00000328839 C20orf78Q9BR46 151 aa15.34■□□□□ 0.05
PPP4R4-202ENST00000328839 LINC00862A6NCI5 91 aa15.33■□□□□ 0.04
PPP4R4-202ENST00000328839 FAM74A3Q4VXF1 159 aa15.33■□□□□ 0.04
PPP4R4-202ENST00000328839 TCAPO15273 167 aa15.31■□□□□ 0.04
PPP4R4-202ENST00000328839 MRPL35Q9NZE8 188 aaKnown RBP15.31■□□□□ 0.04
PPP4R4-202ENST00000328839 TRBV24-1A0A075B6N3 115 aa15.3■□□□□ 0.04
PPP4R4-202ENST00000328839 NDUFA1O15239 70 aa15.3■□□□□ 0.04
PPP4R4-202ENST00000328839 TNFRSF6BO95407 300 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms