RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
SSH2-202ENST00000324677 TMEM242Q9NWH2 141 aa12.36□□□□□ -0.43
SSH2-202ENST00000324677 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
SSH2-202ENST00000324677 ODF1Q14990 250 aa12.35□□□□□ -0.43
SSH2-202ENST00000324677 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
SSH2-202ENST00000324677 MRAP2Q96G30 205 aa12.35□□□□□ -0.43
SSH2-202ENST00000324677 FAM210AQ96ND0 272 aa12.35□□□□□ -0.43
SSH2-202ENST00000324677 CDC42SE2Q9NRR3 84 aa12.35□□□□□ -0.43
SSH2-202ENST00000324677 SS18Q15532 418 aa12.34□□□□□ -0.43
SSH2-202ENST00000324677 CT83Q5H943 113 aa12.34□□□□□ -0.43
SSH2-202ENST00000324677 MRPL52Q86TS9 123 aaKnown RBP12.34□□□□□ -0.43
SSH2-202ENST00000324677 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
SSH2-202ENST00000324677 CD164L2Q6UWJ8 174 aa12.33□□□□□ -0.44
SSH2-202ENST00000324677 BORCS7Q96B45 105 aa12.33□□□□□ -0.44
SSH2-202ENST00000324677 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
SSH2-202ENST00000324677 KRTAP10-8P60410 259 aa12.32□□□□□ -0.44
SSH2-202ENST00000324677 SYCNQ0VAF6 134 aa12.32□□□□□ -0.44
SSH2-202ENST00000324677 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
SSH2-202ENST00000324677 TMEM191AQ9H0A3 160 aa12.32□□□□□ -0.44
SSH2-202ENST00000324677 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
SSH2-202ENST00000324677 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
SSH2-202ENST00000324677 Q6ZRP5 223 aa12.31□□□□□ -0.44
SSH2-202ENST00000324677 ZNF664Q8N3J9 261 aa12.31□□□□□ -0.44
SSH2-202ENST00000324677 A0A1B0GUT8 65 aa12.3□□□□□ -0.44
SSH2-202ENST00000324677 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
SSH2-202ENST00000324677 HIGD1CA8MV81 97 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 RAB4AP20338 218 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 CAMPP49913 170 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 CEBPGP53567 150 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 PTTG1IPP53801 180 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 BLOC1S1P78537 153 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
SSH2-202ENST00000324677 IGLV4-69A0A075B6H9 119 aa12.27□□□□□ -0.45
SSH2-202ENST00000324677 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.45
SSH2-202ENST00000324677 AMN1Q8IY45 258 aa12.27□□□□□ -0.45
SSH2-202ENST00000324677 ISOC2Q96AB3 205 aa12.27□□□□□ -0.45
SSH2-202ENST00000324677 LOC107984640A0A0U1RRK4 108 aa12.26□□□□□ -0.45
SSH2-202ENST00000324677 C1orf196B1AJZ1 125 aa12.26□□□□□ -0.45
SSH2-202ENST00000324677 GAGE2BQ13066 116 aa12.26□□□□□ -0.45
SSH2-202ENST00000324677 LINC01551Q86U37 167 aa12.26□□□□□ -0.45
SSH2-202ENST00000324677 COX7A2LO14548 114 aa12.25□□□□□ -0.45
SSH2-202ENST00000324677 VCYO14598 125 aa12.25□□□□□ -0.45
SSH2-202ENST00000324677 MALP21145 153 aa12.25□□□□□ -0.45
SSH2-202ENST00000324677 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
SSH2-202ENST00000324677 CSDC2Q9Y534 153 aaKnown RBP12.25□□□□□ -0.45
SSH2-202ENST00000324677 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
SSH2-202ENST00000324677 FCER1GP30273 86 aa12.24□□□□□ -0.45
SSH2-202ENST00000324677 NUP35Q8NFH5 326 aa12.24□□□□□ -0.45
SSH2-202ENST00000324677 OSTCQ9NRP0 149 aa12.24□□□□□ -0.45
SSH2-202ENST00000324677 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
SSH2-202ENST00000324677 A0A1W2PNN7 141 aa12.23□□□□□ -0.45
SSH2-202ENST00000324677 RNASE13Q5GAN3 156 aaKnown RBP12.22□□□□□ -0.45
SSH2-202ENST00000324677 NRACQ8N912 160 aa12.22□□□□□ -0.45
SSH2-202ENST00000324677 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
SSH2-202ENST00000324677 EIF5A2Q9GZV4 153 aaKnown RBP12.22□□□□□ -0.45
SSH2-202ENST00000324677 PPP1R17O96001 155 aa12.21□□□□□ -0.45
SSH2-202ENST00000324677 SUMO2P61956 95 aaKnown RBP12.21□□□□□ -0.45
SSH2-202ENST00000324677 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.45
SSH2-202ENST00000324677 RIGQ13278 110 aa12.21□□□□□ -0.45
SSH2-202ENST00000324677 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
SSH2-202ENST00000324677 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
SSH2-202ENST00000324677 TRAV13-1A0A0B4J241 112 aa12.2□□□□□ -0.46
SSH2-202ENST00000324677 ZNF727A8MUV8 499 aa12.2□□□□□ -0.46
SSH2-202ENST00000324677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
SSH2-202ENST00000324677 APOMO95445 188 aa12.2□□□□□ -0.46
SSH2-202ENST00000324677 V9GYV3 84 aa12.2□□□□□ -0.46
SSH2-202ENST00000324677 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
SSH2-202ENST00000324677 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
SSH2-202ENST00000324677 PSORS1C2Q9UIG4 136 aa12.19□□□□□ -0.46
SSH2-202ENST00000324677 Q6ZUT4 128 aa12.18□□□□□ -0.46
SSH2-202ENST00000324677 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
SSH2-202ENST00000324677 SRP19P09132 144 aaKnown RBP12.17□□□□□ -0.46
SSH2-202ENST00000324677 RPL18AQ02543 176 aaKnown RBP12.17□□□□□ -0.46
SSH2-202ENST00000324677 AKAP14Q86UN6 197 aa12.17□□□□□ -0.46
SSH2-202ENST00000324677 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
SSH2-202ENST00000324677 MT-ND6P03923 174 aa12.16□□□□□ -0.46
SSH2-202ENST00000324677 SPAG11BQ08648 103 aa12.16□□□□□ -0.46
SSH2-202ENST00000324677 TMEM18Q96B42 140 aa12.16□□□□□ -0.46
SSH2-202ENST00000324677 LPAP08519 4548 aa12.15□□□□□ -0.46
SSH2-202ENST00000324677 RNF151Q2KHN1 245 aa12.15□□□□□ -0.46
SSH2-202ENST00000324677 MRPL51Q4U2R6 128 aaKnown RBP12.15□□□□□ -0.46
SSH2-202ENST00000324677 FAM104BQ5XKR9 115 aa12.15□□□□□ -0.46
SSH2-202ENST00000324677 PHF5AQ7RTV0 110 aaKnown RBP12.15□□□□□ -0.46
SSH2-202ENST00000324677 OPRPNQ99935 248 aaPredicted RBP12.15□□□□□ -0.46
SSH2-202ENST00000324677 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
SSH2-202ENST00000324677 C1orf137Q5JT78 98 aa12.13□□□□□ -0.47
SSH2-202ENST00000324677 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
SSH2-202ENST00000324677 LINC00862A6NCI5 91 aa12.12□□□□□ -0.47
SSH2-202ENST00000324677 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
SSH2-202ENST00000324677 C20orf78Q9BR46 151 aa12.12□□□□□ -0.47
SSH2-202ENST00000324677 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
SSH2-202ENST00000324677 RPL23P62829 140 aaKnown RBP12.11□□□□□ -0.47
SSH2-202ENST00000324677 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
SSH2-202ENST00000324677 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
SSH2-202ENST00000324677 FAM74A3Q4VXF1 159 aa12.11□□□□□ -0.47
SSH2-202ENST00000324677 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
SSH2-202ENST00000324677 MRPL35Q9NZE8 188 aaKnown RBP12.11□□□□□ -0.47
SSH2-202ENST00000324677 CKS2P33552 79 aa12.1□□□□□ -0.47
SSH2-202ENST00000324677 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
SSH2-202ENST00000324677 IGHV3OR16-9A0A0B4J2B5 98 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms