RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 UMAD1C9J7I0 102 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 KRTAP1-4P0C5Y4 121 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 MALP21145 153 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 GNG4P50150 75 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 CCL20P78556 96 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
SSNA1-201ENST00000322310 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
SSNA1-201ENST00000322310 I3L3M4 83 aa11.77□□□□□ -0.53
SSNA1-201ENST00000322310 ESDP10768 282 aa11.77□□□□□ -0.53
SSNA1-201ENST00000322310 PMCHP20382 165 aa11.77□□□□□ -0.53
SSNA1-201ENST00000322310 EIF5AP63241 154 aaKnown RBP11.77□□□□□ -0.53
SSNA1-201ENST00000322310 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.53
SSNA1-201ENST00000322310 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.53
SSNA1-201ENST00000322310 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
SSNA1-201ENST00000322310 A0A087WZ39 114 aa11.76□□□□□ -0.53
SSNA1-201ENST00000322310 BCL2L11O43521 198 aa11.76□□□□□ -0.53
SSNA1-201ENST00000322310 TSHBP01222 138 aa11.76□□□□□ -0.53
SSNA1-201ENST00000322310 COX7A2LO14548 114 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 NUDT10Q8NFP7 164 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 SMIM12Q96EX1 92 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 MRAP2Q96G30 205 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 NUDT11Q96G61 164 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 MANBALQ9NQG1 85 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 TMEM242Q9NWH2 141 aa11.75□□□□□ -0.53
SSNA1-201ENST00000322310 FAM168BA1KXE4 195 aa11.73□□□□□ -0.53
SSNA1-201ENST00000322310 SMLR1H3BR10 107 aa11.73□□□□□ -0.53
SSNA1-201ENST00000322310 UBE2D1P51668 147 aa11.73□□□□□ -0.53
SSNA1-201ENST00000322310 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
SSNA1-201ENST00000322310 TEX261Q6UWH6 196 aa11.72□□□□□ -0.53
SSNA1-201ENST00000322310 C2orf48Q96LS8 159 aa11.72□□□□□ -0.53
SSNA1-201ENST00000322310 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.53
SSNA1-201ENST00000322310 SMIM15Q7Z3B0 74 aa11.71□□□□□ -0.53
SSNA1-201ENST00000322310 RNASE7Q9H1E1 156 aaKnown RBP11.71□□□□□ -0.53
SSNA1-201ENST00000322310 TRAV1-1A0A0B4J248 108 aa11.7□□□□□ -0.54
SSNA1-201ENST00000322310 C1orf196B1AJZ1 125 aa11.7□□□□□ -0.54
SSNA1-201ENST00000322310 RNASE13Q5GAN3 156 aaKnown RBP11.7□□□□□ -0.54
SSNA1-201ENST00000322310 C5orf38Q86SI9 138 aa11.7□□□□□ -0.54
SSNA1-201ENST00000322310 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
SSNA1-201ENST00000322310 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
SSNA1-201ENST00000322310 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
SSNA1-201ENST00000322310 FAM19A5Q7Z5A7 132 aaPredicted RBP11.69□□□□□ -0.54
SSNA1-201ENST00000322310 RPL13AP40429 203 aaKnown RBP11.68□□□□□ -0.54
SSNA1-201ENST00000322310 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
SSNA1-201ENST00000322310 MED9Q9NWA0 146 aa11.68□□□□□ -0.54
SSNA1-201ENST00000322310 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
SSNA1-201ENST00000322310 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
SSNA1-201ENST00000322310 TSPAN13O95857 204 aa11.67□□□□□ -0.54
SSNA1-201ENST00000322310 ZNF345Q14585 488 aa11.67□□□□□ -0.54
SSNA1-201ENST00000322310 RNF151Q2KHN1 245 aa11.67□□□□□ -0.54
SSNA1-201ENST00000322310 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
SSNA1-201ENST00000322310 K7EN84 100 aa11.65□□□□□ -0.54
SSNA1-201ENST00000322310 PDE6DO43924 150 aa11.65□□□□□ -0.54
SSNA1-201ENST00000322310 POLR2KP53803 58 aaKnown RBP11.64□□□□□ -0.55
SSNA1-201ENST00000322310 KRTAP7-1Q8IUC3 87 aa11.64□□□□□ -0.55
SSNA1-201ENST00000322310 TRBV27A0A0K0K1C4 114 aa11.63□□□□□ -0.55
SSNA1-201ENST00000322310 C10orf25Q5T742 122 aa11.63□□□□□ -0.55
SSNA1-201ENST00000322310 MRPL35Q9NZE8 188 aaKnown RBP11.63□□□□□ -0.55
SSNA1-201ENST00000322310 KANTRA0A1W2PQU2 76 aa11.62□□□□□ -0.55
SSNA1-201ENST00000322310 IMMP2LQ96T52 175 aa11.62□□□□□ -0.55
SSNA1-201ENST00000322310 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
SSNA1-201ENST00000322310 UBE2BP63146 152 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 GAGE2EQ4V326 116 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 Q6ZUT4 128 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 OR10D4PQ8NGN7 298 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 OCC1Q8TAD7 63 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 GAGE2DQ9UEU5 116 aa11.61□□□□□ -0.55
SSNA1-201ENST00000322310 M0QXV9 152 aa11.6□□□□□ -0.55
SSNA1-201ENST00000322310 CARHSP1Q9Y2V2 147 aaKnown RBP11.6□□□□□ -0.55
SSNA1-201ENST00000322310 CSDC2Q9Y534 153 aaKnown RBP11.6□□□□□ -0.55
SSNA1-201ENST00000322310 FCER1GP30273 86 aa11.59□□□□□ -0.55
SSNA1-201ENST00000322310 NDUFA1O15239 70 aa11.58□□□□□ -0.56
SSNA1-201ENST00000322310 TLX1NBP0CAT3 122 aa11.58□□□□□ -0.56
SSNA1-201ENST00000322310 UNQ6190/PRO20217Q6UXQ8 127 aa11.58□□□□□ -0.56
SSNA1-201ENST00000322310 C6orf48Q9UBA6 75 aa11.58□□□□□ -0.56
SSNA1-201ENST00000322310 TEX46H3BTG2 121 aa11.57□□□□□ -0.56
SSNA1-201ENST00000322310 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
SSNA1-201ENST00000322310 HMSDA8MTL9 139 aa11.56□□□□□ -0.56
SSNA1-201ENST00000322310 SMKR1H3BMG3 65 aa11.56□□□□□ -0.56
SSNA1-201ENST00000322310 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
SSNA1-201ENST00000322310 F8WDY8 70 aa11.55□□□□□ -0.56
SSNA1-201ENST00000322310 VCYO14598 125 aa11.55□□□□□ -0.56
SSNA1-201ENST00000322310 RAB4AP20338 218 aa11.55□□□□□ -0.56
SSNA1-201ENST00000322310 SMAGPQ0VAQ4 97 aa11.54□□□□□ -0.56
SSNA1-201ENST00000322310 AMN1Q8IY45 258 aa11.54□□□□□ -0.56
SSNA1-201ENST00000322310 TMEM191AQ9H0A3 160 aa11.54□□□□□ -0.56
SSNA1-201ENST00000322310 A0A087X002 238 aa11.53□□□□□ -0.56
SSNA1-201ENST00000322310 A8MWL6 223 aa11.53□□□□□ -0.56
SSNA1-201ENST00000322310 ZNF861PO60384 105 aa11.53□□□□□ -0.56
SSNA1-201ENST00000322310 TMEM241Q24JQ0 296 aa11.53□□□□□ -0.56
SSNA1-201ENST00000322310 MUC17Q685J3 4493 aa11.52□□□□□ -0.56
SSNA1-201ENST00000322310 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
SSNA1-201ENST00000322310 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
SSNA1-201ENST00000322310 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
SSNA1-201ENST00000322310 SUMO2P61956 95 aaKnown RBP11.5□□□□□ -0.57
SSNA1-201ENST00000322310 C9orf129Q5T035 196 aaKnown RBP11.5□□□□□ -0.57
SSNA1-201ENST00000322310 NRACQ8N912 160 aa11.5□□□□□ -0.57
SSNA1-201ENST00000322310 FAM104AQ969W3 186 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms