RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CAMPP49913 170 aa9.35□□□□□ -0.91
PPP1CA-201ENST00000312989 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
PPP1CA-201ENST00000312989 A0A1B0GW15 77 aa9.34□□□□□ -0.91
PPP1CA-201ENST00000312989 VCYO14598 125 aa9.34□□□□□ -0.91
PPP1CA-201ENST00000312989 IFITM2Q01629 132 aa9.34□□□□□ -0.91
PPP1CA-201ENST00000312989 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
PPP1CA-201ENST00000312989 FAM104AQ969W3 186 aa9.34□□□□□ -0.91
PPP1CA-201ENST00000312989 LINC00959A0A1B0GUT2 108 aa9.33□□□□□ -0.92
PPP1CA-201ENST00000312989 hDV102S1A0JD36 115 aa9.33□□□□□ -0.92
PPP1CA-201ENST00000312989 C7orf77A4D0Y5 90 aa9.33□□□□□ -0.92
PPP1CA-201ENST00000312989 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
PPP1CA-201ENST00000312989 UBE2D4Q9Y2X8 147 aa9.33□□□□□ -0.92
PPP1CA-201ENST00000312989 GVQW2A0A096LPI5 108 aaPredicted RBP9.32□□□□□ -0.92
PPP1CA-201ENST00000312989 LINC00862A6NCI5 91 aa9.32□□□□□ -0.92
PPP1CA-201ENST00000312989 HBBP68871 147 aa9.32□□□□□ -0.92
PPP1CA-201ENST00000312989 CLLU1Q5K131 121 aa9.32□□□□□ -0.92
PPP1CA-201ENST00000312989 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
PPP1CA-201ENST00000312989 PPP1R17O96001 155 aa9.31□□□□□ -0.92
PPP1CA-201ENST00000312989 NPYP01303 97 aa9.31□□□□□ -0.92
PPP1CA-201ENST00000312989 CSDC2Q9Y534 153 aaKnown RBP9.31□□□□□ -0.92
PPP1CA-201ENST00000312989 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
PPP1CA-201ENST00000312989 D6R8Y8 96 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 CCL25O15444 150 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 TNFRSF6BO95407 300 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 ZNF664Q8N3J9 261 aa9.3□□□□□ -0.92
PPP1CA-201ENST00000312989 PLA2G1BP04054 148 aaKnown RBP9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 CKS2P33552 79 aa9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 XCL1P47992 114 aa9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 ATP5L2Q7Z4Y8 100 aa9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 SMIM2Q9BVW6 85 aa9.29□□□□□ -0.92
PPP1CA-201ENST00000312989 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
PPP1CA-201ENST00000312989 Q6ZUT4 128 aa9.28□□□□□ -0.92
PPP1CA-201ENST00000312989 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
PPP1CA-201ENST00000312989 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
PPP1CA-201ENST00000312989 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 PHOX2AO14813 284 aa9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 FCER1GP30273 86 aa9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 HNRNPA3P51991 378 aaKnown RBP9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 RNASE13Q5GAN3 156 aaKnown RBP9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 CD164L2Q6UWJ8 174 aa9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 KIR2DL4Q99706 377 aa9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
PPP1CA-201ENST00000312989 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
PPP1CA-201ENST00000312989 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
PPP1CA-201ENST00000312989 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
PPP1CA-201ENST00000312989 F8W036 122 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 PPBPP02775 128 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 S100A8P05109 93 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 RAB14P61106 215 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
PPP1CA-201ENST00000312989 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 TCAPO15273 167 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 PRSS3P2Q8NHM4 247 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 A0A087WYN8 130 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 COX6A2Q02221 97 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 SS18Q15532 418 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 ORMDL3Q8N138 153 aa9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
PPP1CA-201ENST00000312989 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
PPP1CA-201ENST00000312989 MT-ND4LP03901 98 aa9.23□□□□□ -0.93
PPP1CA-201ENST00000312989 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
PPP1CA-201ENST00000312989 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
PPP1CA-201ENST00000312989 TMEM218A2RU14 115 aa9.22□□□□□ -0.93
PPP1CA-201ENST00000312989 C1orf196B1AJZ1 125 aa9.22□□□□□ -0.93
PPP1CA-201ENST00000312989 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
PPP1CA-201ENST00000312989 A0A096LNI7 61 aa9.21□□□□□ -0.94
PPP1CA-201ENST00000312989 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
PPP1CA-201ENST00000312989 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.94
PPP1CA-201ENST00000312989 MRPS36P82909 103 aaKnown RBP9.21□□□□□ -0.94
PPP1CA-201ENST00000312989 UQCC3Q6UW78 93 aa9.21□□□□□ -0.94
PPP1CA-201ENST00000312989 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
PPP1CA-201ENST00000312989 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
PPP1CA-201ENST00000312989 TMEM18Q96B42 140 aa9.19□□□□□ -0.94
PPP1CA-201ENST00000312989 IMMP2LQ96T52 175 aa9.19□□□□□ -0.94
PPP1CA-201ENST00000312989 LAMTOR2Q9Y2Q5 125 aa9.19□□□□□ -0.94
PPP1CA-201ENST00000312989 TNXBP22105 4242 aa9.18□□□□□ -0.94
PPP1CA-201ENST00000312989 COX7A2LO14548 114 aa9.18□□□□□ -0.94
PPP1CA-201ENST00000312989 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
PPP1CA-201ENST00000312989 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
PPP1CA-201ENST00000312989 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
PPP1CA-201ENST00000312989 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
PPP1CA-201ENST00000312989 IGLV4-3A0A075B6K6 122 aa9.17□□□□□ -0.94
PPP1CA-201ENST00000312989 Q6ZRU5 148 aa9.17□□□□□ -0.94
PPP1CA-201ENST00000312989 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
PPP1CA-201ENST00000312989 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
PPP1CA-201ENST00000312989 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
PPP1CA-201ENST00000312989 C10orf91Q5T1B1 145 aa9.16□□□□□ -0.94
PPP1CA-201ENST00000312989 SEC11CQ9BY50 192 aa9.16□□□□□ -0.94
PPP1CA-201ENST00000312989 LOC389332A0A1B0GUA5 103 aa9.15□□□□□ -0.94
PPP1CA-201ENST00000312989 MAJINQ3KP22 176 aa9.15□□□□□ -0.94
PPP1CA-201ENST00000312989 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms