RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLPIP03973 132 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 GCSHP23434 173 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 TGIF2-C20orf24A0A0A6YYL0 155 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 GAGE12HA6NDE8 117 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 SMR3BP02814 79 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-201ENST00000311943 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 Q6ZUT4 128 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 ORMDL3Q8N138 153 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
SCFD1-201ENST00000311943 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
SCFD1-201ENST00000311943 XCL1P47992 114 aa7.83□□□□□ -1.16
SCFD1-201ENST00000311943 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-201ENST00000311943 RMI2Q96E14 147 aa7.83□□□□□ -1.16
SCFD1-201ENST00000311943 KIR2DL4Q99706 377 aa7.83□□□□□ -1.16
SCFD1-201ENST00000311943 C20orf78Q9BR46 151 aa7.83□□□□□ -1.16
SCFD1-201ENST00000311943 HIGD2BQ4VC39 106 aa7.83□□□□□ -1.16
SCFD1-201ENST00000311943 CTDSP1Q9GZU7 261 aa7.83□□□□□ -1.16
SCFD1-201ENST00000311943 LINC00959A0A1B0GUT2 108 aa7.82□□□□□ -1.16
SCFD1-201ENST00000311943 S100A8P05109 93 aa7.82□□□□□ -1.16
SCFD1-201ENST00000311943 OR5A1Q8NGJ0 315 aa7.82□□□□□ -1.16
SCFD1-201ENST00000311943 PANO1I0J062 215 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 CCL25O15444 150 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-201ENST00000311943 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-201ENST00000311943 ZNF664Q8N3J9 261 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 C15orf56Q8N910 161 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 COX11Q9Y6N1 276 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 PKIAP61925 76 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 FOXI1Q12951 378 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
SCFD1-201ENST00000311943 MRPL52Q86TS9 123 aaKnown RBP7.81□□□□□ -1.16
SCFD1-201ENST00000311943 PPBPP02775 128 aa7.8□□□□□ -1.16
SCFD1-201ENST00000311943 H7C423 109 aa7.79□□□□□ -1.16
SCFD1-201ENST00000311943 PPP1R17O96001 155 aa7.79□□□□□ -1.16
SCFD1-201ENST00000311943 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
SCFD1-201ENST00000311943 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
SCFD1-201ENST00000311943 RHEBQ15382 184 aa7.79□□□□□ -1.16
SCFD1-201ENST00000311943 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
SCFD1-201ENST00000311943 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
SCFD1-201ENST00000311943 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-201ENST00000311943 RPL32P62910 135 aaKnown RBP7.78□□□□□ -1.16
SCFD1-201ENST00000311943 CBLN2Q8IUK8 224 aa7.78□□□□□ -1.16
SCFD1-201ENST00000311943 S100PP25815 95 aa7.78□□□□□ -1.16
SCFD1-201ENST00000311943 MRPL18Q9H0U6 180 aaKnown RBP7.78□□□□□ -1.16
SCFD1-201ENST00000311943 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
SCFD1-201ENST00000311943 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
SCFD1-201ENST00000311943 PHOX2AO14813 284 aa7.77□□□□□ -1.17
SCFD1-201ENST00000311943 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
SCFD1-201ENST00000311943 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-201ENST00000311943 CHTF8P0CG12 524 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 RAB5AP20339 215 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 Q8N8P6 123 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 YPEL4Q96NS1 127 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-201ENST00000311943 FABP9Q0Z7S8 132 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 SVBPQ8N300 66 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 URB1-AS1Q96HZ7 61 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 GNB1LQ9BYB4 327 aa7.76□□□□□ -1.17
SCFD1-201ENST00000311943 COX6A2Q02221 97 aa7.75□□□□□ -1.17
SCFD1-201ENST00000311943 C2orf66Q6UXQ4 117 aa7.75□□□□□ -1.17
SCFD1-201ENST00000311943 Q6ZSA8 131 aa7.75□□□□□ -1.17
SCFD1-201ENST00000311943 SCXQ7RTU7 201 aa7.75□□□□□ -1.17
SCFD1-201ENST00000311943 IGLV4-3A0A075B6K6 122 aa7.74□□□□□ -1.17
SCFD1-201ENST00000311943 SNAPINO95295 136 aa7.74□□□□□ -1.17
SCFD1-201ENST00000311943 Q8N1X5 172 aa7.74□□□□□ -1.17
SCFD1-201ENST00000311943 CSDC2Q9Y534 153 aaKnown RBP7.74□□□□□ -1.17
SCFD1-201ENST00000311943 TRAV9-1A0A075B6T8 112 aa7.74□□□□□ -1.17
SCFD1-201ENST00000311943 LINC00173Q6ZV60 143 aa7.74□□□□□ -1.17
SCFD1-201ENST00000311943 SS18Q15532 418 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 PMCHL1Q16048 86 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 SCO1O75880 301 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 CD164L2Q6UWJ8 174 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 TIMM21Q9BVV7 248 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 TRAPPC1Q9Y5R8 145 aa7.73□□□□□ -1.17
SCFD1-201ENST00000311943 SRRM2Q9UQ35 2752 aaKnown RBP7.72□□□□□ -1.17
SCFD1-201ENST00000311943 NDUFA5Q16718 116 aa7.72□□□□□ -1.17
SCFD1-201ENST00000311943 PRSS3P2Q8NHM4 247 aa7.72□□□□□ -1.17
SCFD1-201ENST00000311943 IGIPA6NJ69 53 aa7.71□□□□□ -1.17
SCFD1-201ENST00000311943 IFITM10A6NMD0 228 aa7.71□□□□□ -1.17
SCFD1-201ENST00000311943 SPANXA1Q9NS26 97 aa7.71□□□□□ -1.17
SCFD1-201ENST00000311943 C1orf196B1AJZ1 125 aa7.71□□□□□ -1.18
SCFD1-201ENST00000311943 LINC00242Q5T6M2 205 aa7.71□□□□□ -1.18
SCFD1-201ENST00000311943 Q5VSD8 79 aa7.71□□□□□ -1.18
SCFD1-201ENST00000311943 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
SCFD1-201ENST00000311943 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
SCFD1-201ENST00000311943 A0A096LNJ9 63 aa7.7□□□□□ -1.18
SCFD1-201ENST00000311943 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-201ENST00000311943 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
SCFD1-201ENST00000311943 C14orf177Q52M58 125 aa7.7□□□□□ -1.18
SCFD1-201ENST00000311943 C18orf32Q8TCD1 76 aa7.7□□□□□ -1.18
SCFD1-201ENST00000311943 NXT2Q9NPJ8 142 aaKnown RBP7.7□□□□□ -1.18
SCFD1-201ENST00000311943 CYSLTR1Q9Y271 337 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms