RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 PRELID3AQ96N28 172 aa11.91□□□□□ -0.5
SPSB3-201ENST00000301717 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
SPSB3-201ENST00000301717 CTDSP1Q9GZU7 261 aa11.91□□□□□ -0.5
SPSB3-201ENST00000301717 TCAPO15273 167 aa11.9□□□□□ -0.5
SPSB3-201ENST00000301717 XGP55808 180 aa11.9□□□□□ -0.5
SPSB3-201ENST00000301717 KIR2DL4Q99706 377 aa11.9□□□□□ -0.5
SPSB3-201ENST00000301717 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
SPSB3-201ENST00000301717 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
SPSB3-201ENST00000301717 RNASE13Q5GAN3 156 aaKnown RBP11.89□□□□□ -0.51
SPSB3-201ENST00000301717 OR5A1Q8NGJ0 315 aa11.89□□□□□ -0.51
SPSB3-201ENST00000301717 TMEM101Q96IK0 257 aa11.89□□□□□ -0.51
SPSB3-201ENST00000301717 TRAV8-4A0A0B4J246 113 aa11.88□□□□□ -0.51
SPSB3-201ENST00000301717 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
SPSB3-201ENST00000301717 PPBPP02775 128 aa11.88□□□□□ -0.51
SPSB3-201ENST00000301717 PRSS1P07477 247 aa11.88□□□□□ -0.51
SPSB3-201ENST00000301717 ZNF25P17030 456 aaPredicted RBP11.88□□□□□ -0.51
SPSB3-201ENST00000301717 RPL39P62891 51 aaKnown RBP11.88□□□□□ -0.51
SPSB3-201ENST00000301717 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
SPSB3-201ENST00000301717 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
SPSB3-201ENST00000301717 RPL32P62910 135 aaKnown RBP11.87□□□□□ -0.51
SPSB3-201ENST00000301717 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
SPSB3-201ENST00000301717 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
SPSB3-201ENST00000301717 UBE2D4Q9Y2X8 147 aa11.87□□□□□ -0.51
SPSB3-201ENST00000301717 FAT1Q14517 4588 aa11.87□□□□□ -0.51
SPSB3-201ENST00000301717 PHOX2AO14813 284 aa11.86□□□□□ -0.51
SPSB3-201ENST00000301717 KIAA1644Q3SXP7 199 aa11.86□□□□□ -0.51
SPSB3-201ENST00000301717 Q6ZUT4 128 aa11.86□□□□□ -0.51
SPSB3-201ENST00000301717 LINC00959A0A1B0GUT2 108 aa11.85□□□□□ -0.51
SPSB3-201ENST00000301717 XCL1P47992 114 aa11.85□□□□□ -0.51
SPSB3-201ENST00000301717 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
SPSB3-201ENST00000301717 ZNF664Q8N3J9 261 aa11.85□□□□□ -0.51
SPSB3-201ENST00000301717 ABCA13Q86UQ4 5058 aa11.84□□□□□ -0.51
SPSB3-201ENST00000301717 C14orf177Q52M58 125 aa11.84□□□□□ -0.51
SPSB3-201ENST00000301717 OPRPNQ99935 248 aaPredicted RBP11.84□□□□□ -0.51
SPSB3-201ENST00000301717 CCL25O15444 150 aa11.83□□□□□ -0.52
SPSB3-201ENST00000301717 S100PP25815 95 aa11.83□□□□□ -0.52
SPSB3-201ENST00000301717 C15orf56Q8N910 161 aa11.83□□□□□ -0.52
SPSB3-201ENST00000301717 FAM104AQ969W3 186 aa11.83□□□□□ -0.52
SPSB3-201ENST00000301717 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
SPSB3-201ENST00000301717 SMR3BP02814 79 aaPredicted RBP11.82□□□□□ -0.52
SPSB3-201ENST00000301717 FOXI1Q12951 378 aa11.82□□□□□ -0.52
SPSB3-201ENST00000301717 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
SPSB3-201ENST00000301717 hDV102S1A0JD36 115 aa11.81□□□□□ -0.52
SPSB3-201ENST00000301717 SLPIP03973 132 aa11.81□□□□□ -0.52
SPSB3-201ENST00000301717 HIGD2BQ4VC39 106 aa11.81□□□□□ -0.52
SPSB3-201ENST00000301717 SMCO4Q9NRQ5 59 aa11.81□□□□□ -0.52
SPSB3-201ENST00000301717 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
SPSB3-201ENST00000301717 Q8N1X5 172 aa11.8□□□□□ -0.52
SPSB3-201ENST00000301717 TMA7Q9Y2S6 64 aaKnown RBP11.8□□□□□ -0.52
SPSB3-201ENST00000301717 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
SPSB3-201ENST00000301717 CBLN2Q8IUK8 224 aa11.79□□□□□ -0.52
SPSB3-201ENST00000301717 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
SPSB3-201ENST00000301717 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
SPSB3-201ENST00000301717 PRSS47A8MTI9 375 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 SCO1O75880 301 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 RAB5AP20339 215 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 Q6ZSA8 131 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 Q8N8P6 123 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 TMEM18Q96B42 140 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 TIMM21Q9BVV7 248 aa11.78□□□□□ -0.52
SPSB3-201ENST00000301717 TGIF2-C20orf24A0A0A6YYL0 155 aa11.77□□□□□ -0.52
SPSB3-201ENST00000301717 SS18Q15532 418 aa11.77□□□□□ -0.52
SPSB3-201ENST00000301717 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.52
SPSB3-201ENST00000301717 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.53
SPSB3-201ENST00000301717 GNB1LQ9BYB4 327 aa11.77□□□□□ -0.53
SPSB3-201ENST00000301717 SPANXA1Q9NS26 97 aa11.76□□□□□ -0.53
SPSB3-201ENST00000301717 C9orf163Q8N9P6 203 aa11.75□□□□□ -0.53
SPSB3-201ENST00000301717 MRPL18Q9H0U6 180 aaKnown RBP11.75□□□□□ -0.53
SPSB3-201ENST00000301717 PANO1I0J062 215 aa11.74□□□□□ -0.53
SPSB3-201ENST00000301717 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
SPSB3-201ENST00000301717 ZC2HC1BQ5TFG8 222 aa11.74□□□□□ -0.53
SPSB3-201ENST00000301717 CD164L2Q6UWJ8 174 aa11.74□□□□□ -0.53
SPSB3-201ENST00000301717 SCXQ7RTU7 201 aa11.74□□□□□ -0.53
SPSB3-201ENST00000301717 CNBPP62633 177 aaKnown RBP11.73□□□□□ -0.53
SPSB3-201ENST00000301717 ALKBH7Q9BT30 221 aaPredicted RBP11.73□□□□□ -0.53
SPSB3-201ENST00000301717 IGLV4-3A0A075B6K6 122 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 GVQW2A0A096LPI5 108 aaPredicted RBP11.72□□□□□ -0.53
SPSB3-201ENST00000301717 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 FABP9Q0Z7S8 132 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 CFAP161Q6P656 301 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 C2orf66Q6UXQ4 117 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
SPSB3-201ENST00000301717 IFITM10A6NMD0 228 aa11.71□□□□□ -0.53
SPSB3-201ENST00000301717 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.53
SPSB3-201ENST00000301717 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
SPSB3-201ENST00000301717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.71□□□□□ -0.53
SPSB3-201ENST00000301717 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
SPSB3-201ENST00000301717 Q5VSD8 79 aa11.7□□□□□ -0.54
SPSB3-201ENST00000301717 SDIM1Q6ZPB5 146 aa11.7□□□□□ -0.54
SPSB3-201ENST00000301717 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
SPSB3-201ENST00000301717 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
SPSB3-201ENST00000301717 NXT2Q9NPJ8 142 aaKnown RBP11.7□□□□□ -0.54
SPSB3-201ENST00000301717 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
SPSB3-201ENST00000301717 ORMDL2Q53FV1 153 aa11.69□□□□□ -0.54
SPSB3-201ENST00000301717 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
SPSB3-201ENST00000301717 VPS13BQ7Z7G8 4022 aa11.69□□□□□ -0.54
SPSB3-201ENST00000301717 IGHV1-58A0A0C4DH39 117 aa11.69□□□□□ -0.54
SPSB3-201ENST00000301717 COX7A2LO14548 114 aa11.69□□□□□ -0.54
SPSB3-201ENST00000301717 MT-ND6P03923 174 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms