RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 RPL39P62891 51 aaKnown RBP8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 CLUHP3Q96NS8 147 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 TRBV20-1A0A075B6N2 111 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 GAGE12HA6NDE8 117 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 PIK3CD-AS1Q5SR53 167 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 SBSPONQ8IVN8 264 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 SIGMAR1Q99720 223 aa8.22□□□□□ -1.09
CHRNB3-201ENST00000289957 A0A087WWL8 130 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 J3QQQ9 107 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 M0QXV9 152 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 ZNF56Q15929 161 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 C20orf203Q8NBC4 194 aa8.21□□□□□ -1.1
CHRNB3-201ENST00000289957 F5H697 171 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 PTH2Q96A98 100 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 STAB2Q8WWQ8 2551 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 I3L3M4 83 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 LGALS3P17931 250 aaKnown RBP8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 C10orf126Q8N4M7 172 aa8.2□□□□□ -1.1
CHRNB3-201ENST00000289957 EMP1P54849 157 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 SH2D6Q7Z4S9 175 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 X6R8D5 127 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 A0A0B4J2C4 111 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 PLAC8L1A1L4L8 177 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 P0DMU3 169 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 TMEM170BQ5T4T1 132 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 VCX2Q9H322 139 aa8.19□□□□□ -1.1
CHRNB3-201ENST00000289957 APOMO95445 188 aa8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 CFC1P0CG37 223 aa8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 FOXI1Q12951 378 aa8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 TGP01266 2768 aa8.18□□□□□ -1.1
CHRNB3-201ENST00000289957 RHODO00212 210 aa8.17□□□□□ -1.1
CHRNB3-201ENST00000289957 FAM74A4Q5TZK3 123 aa8.17□□□□□ -1.1
CHRNB3-201ENST00000289957 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
CHRNB3-201ENST00000289957 LINC00467Q9BRT7 94 aa8.17□□□□□ -1.1
CHRNB3-201ENST00000289957 APOC4P55056 127 aa8.17□□□□□ -1.1
CHRNB3-201ENST00000289957 PRO1854Q9UHT4 67 aa8.17□□□□□ -1.1
CHRNB3-201ENST00000289957 NACAE9PAV3 2078 aa8.16□□□□□ -1.1
CHRNB3-201ENST00000289957 TEN1Q86WV5 123 aa8.16□□□□□ -1.1
CHRNB3-201ENST00000289957 KIR2DL5BQ8NHK3 375 aa8.16□□□□□ -1.1
CHRNB3-201ENST00000289957 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
CHRNB3-201ENST00000289957 OVOL2Q9BRP0 275 aa8.16□□□□□ -1.1
CHRNB3-201ENST00000289957 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 M0R2P5 195 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 PSMB2P49721 201 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 NOP10Q9NPE3 64 aaKnown RBP8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 A8MZ25 164 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 TCL1BO95988 128 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
CHRNB3-201ENST00000289957 IGHV4-28A0A0C4DH34 117 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 A8MWV9 139 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 Q6ZTI0 123 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 TMEM263Q8WUH6 116 aaKnown RBP8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 RNF183Q96D59 192 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 IGHV3-33P01772 117 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 CELA1Q9UNI1 258 aa8.14□□□□□ -1.11
CHRNB3-201ENST00000289957 IGHV3-73A0A0B4J1V6 119 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 ZNF415Q09FC8 603 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 Q8NAQ8 132 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 IL17DQ8TAD2 202 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 CSMD3Q7Z407 3707 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 DNAJC30Q96LL9 226 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 SPANXDQ9BXN6 97 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
CHRNB3-201ENST00000289957 A4D1N5 150 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 SMAGPQ0VAQ4 97 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 Q9UF83 564 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 LYSTQ99698 3801 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 TRGV1A0A0A0MS02 117 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 A0A0J9YXV3 536 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 IGHV3-53P01767 116 aa8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 OPRPNQ99935 248 aaPredicted RBP8.12□□□□□ -1.11
CHRNB3-201ENST00000289957 CARD19Q96LW7 228 aa8.11□□□□□ -1.11
CHRNB3-201ENST00000289957 LITAFQ99732 161 aa8.11□□□□□ -1.11
CHRNB3-201ENST00000289957 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms