RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TSKUQ8WUA8 353 aa6.19□□□□□ -1.42
VPS41-201ENST00000265745 CHCHD10Q8WYQ3 142 aaPredicted RBP6.19□□□□□ -1.42
VPS41-201ENST00000265745 DPH3Q96FX2 82 aa6.19□□□□□ -1.42
VPS41-201ENST00000265745 SMIM7Q9BQ49 75 aa6.19□□□□□ -1.42
VPS41-201ENST00000265745 EIF5A2Q9GZV4 153 aaKnown RBP6.19□□□□□ -1.42
VPS41-201ENST00000265745 A0A1B0GUT8 65 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 HIGD1CA8MV81 97 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 APCSP02743 223 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 ESDP10768 282 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 PMCHP20382 165 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
VPS41-201ENST00000265745 BORCS7Q96B45 105 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 RNF185Q96GF1 192 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 FAM210AQ96ND0 272 aa6.18□□□□□ -1.42
VPS41-201ENST00000265745 A0A087WYN8 130 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 TSHBP01222 138 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 SRP19P09132 144 aaKnown RBP6.17□□□□□ -1.42
VPS41-201ENST00000265745 CHTF8P0CG12 524 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 ZNF25P17030 456 aaPredicted RBP6.17□□□□□ -1.42
VPS41-201ENST00000265745 RAB4AP20338 218 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 RPS10P46783 165 aaKnown RBP6.17□□□□□ -1.42
VPS41-201ENST00000265745 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
VPS41-201ENST00000265745 SERTAD4-AS1Q5TG53 156 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 OR5A1Q8NGJ0 315 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 SPACA4Q8TDM5 124 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 OSTCQ9NRP0 149 aa6.17□□□□□ -1.42
VPS41-201ENST00000265745 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
VPS41-201ENST00000265745 COX6A2Q02221 97 aa6.16□□□□□ -1.42
VPS41-201ENST00000265745 FOXI1Q12951 378 aa6.16□□□□□ -1.42
VPS41-201ENST00000265745 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
VPS41-201ENST00000265745 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
VPS41-201ENST00000265745 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
VPS41-201ENST00000265745 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 LINC00959A0A1B0GUT2 108 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 XCL1P47992 114 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 MRPL52Q86TS9 123 aaKnown RBP6.15□□□□□ -1.42
VPS41-201ENST00000265745 AMN1Q8IY45 258 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 PRSS3P2Q8NHM4 247 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 MRAP2Q96G30 205 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 TMEM101Q96IK0 257 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 CDC42SE2Q9NRR3 84 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 TMEM242Q9NWH2 141 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 V9GYV3 84 aa6.15□□□□□ -1.42
VPS41-201ENST00000265745 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
VPS41-201ENST00000265745 VCYO14598 125 aa6.14□□□□□ -1.43
VPS41-201ENST00000265745 CCL25O15444 150 aa6.14□□□□□ -1.43
VPS41-201ENST00000265745 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
VPS41-201ENST00000265745 Q6ZRU5 148 aa6.14□□□□□ -1.43
VPS41-201ENST00000265745 NUP35Q8NFH5 326 aa6.14□□□□□ -1.43
VPS41-201ENST00000265745 C7orf77A4D0Y5 90 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 C9JQL5 133 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 RIGQ13278 110 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 MAJINQ3KP22 176 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 FAM74A3Q4VXF1 159 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 ZNF664Q8N3J9 261 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
VPS41-201ENST00000265745 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 A0A1B0GVG6 124 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 SMKR1H3BMG3 65 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 PPP1R17O96001 155 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 RPL23P62829 140 aaKnown RBP6.12□□□□□ -1.43
VPS41-201ENST00000265745 SS18Q15532 418 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 CD164L2Q6UWJ8 174 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 NRACQ8N912 160 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 NAT8BQ9UHF3 227 aa6.12□□□□□ -1.43
VPS41-201ENST00000265745 CSDC2Q9Y534 153 aaKnown RBP6.12□□□□□ -1.43
VPS41-201ENST00000265745 PHOX2AO14813 284 aa6.11□□□□□ -1.43
VPS41-201ENST00000265745 FCER1GP30273 86 aa6.11□□□□□ -1.43
VPS41-201ENST00000265745 FAM104BQ5XKR9 115 aa6.11□□□□□ -1.43
VPS41-201ENST00000265745 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
VPS41-201ENST00000265745 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
VPS41-201ENST00000265745 A0A096LNI7 61 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 SMIM27A0A1W2PRY6 76 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 ADIRFQ15847 76 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 MRPL51Q4U2R6 128 aaKnown RBP6.1□□□□□ -1.43
VPS41-201ENST00000265745 STPG4Q8N801 248 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 KIR2DL4Q99706 377 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 LINC00474Q9P2X8 69 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 NAT8Q9UHE5 227 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 UBE2D4Q9Y2X8 147 aa6.1□□□□□ -1.43
VPS41-201ENST00000265745 TRBV24-1A0A075B6N3 115 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 LINC00862A6NCI5 91 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 PPP1R2P9O14990 202 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 SYCNQ0VAF6 134 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 PEA15Q15121 130 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 CARD19Q96LW7 228 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
VPS41-201ENST00000265745 A0A1B0GW15 77 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 CAMPP49913 170 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 RPL32P62910 135 aaKnown RBP6.08□□□□□ -1.44
VPS41-201ENST00000265745 PRR3P79522 188 aaKnown RBP6.08□□□□□ -1.44
VPS41-201ENST00000265745 SMAGPQ0VAQ4 97 aa6.08□□□□□ -1.44
VPS41-201ENST00000265745 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms