RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
USE1-201ENST00000263897 MRPL51Q4U2R6 128 aaKnown RBP10.29□□□□□ -0.76
USE1-201ENST00000263897 CDC42SE2Q9NRR3 84 aa10.29□□□□□ -0.76
USE1-201ENST00000263897 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
USE1-201ENST00000263897 A0A1B0GW15 77 aa10.28□□□□□ -0.76
USE1-201ENST00000263897 C7orf77A4D0Y5 90 aa10.28□□□□□ -0.76
USE1-201ENST00000263897 CAMPP49913 170 aa10.28□□□□□ -0.76
USE1-201ENST00000263897 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
USE1-201ENST00000263897 FOXI1Q12951 378 aa10.28□□□□□ -0.76
USE1-201ENST00000263897 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
USE1-201ENST00000263897 LINC00862A6NCI5 91 aa10.27□□□□□ -0.77
USE1-201ENST00000263897 FCER1GP30273 86 aa10.27□□□□□ -0.77
USE1-201ENST00000263897 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
USE1-201ENST00000263897 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
USE1-201ENST00000263897 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
USE1-201ENST00000263897 CCL25O15444 150 aa10.26□□□□□ -0.77
USE1-201ENST00000263897 XCL1P47992 114 aa10.26□□□□□ -0.77
USE1-201ENST00000263897 HIGD2BQ4VC39 106 aa10.26□□□□□ -0.77
USE1-201ENST00000263897 DPH3Q96FX2 82 aa10.26□□□□□ -0.77
USE1-201ENST00000263897 KIR2DL4Q99706 377 aa10.26□□□□□ -0.77
USE1-201ENST00000263897 HERC1Q15751 4861 aa10.25□□□□□ -0.77
USE1-201ENST00000263897 TRBV24-1A0A075B6N3 115 aa10.25□□□□□ -0.77
USE1-201ENST00000263897 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
USE1-201ENST00000263897 J3QL48 77 aa10.25□□□□□ -0.77
USE1-201ENST00000263897 SS18Q15532 418 aa10.25□□□□□ -0.77
USE1-201ENST00000263897 C20orf78Q9BR46 151 aa10.25□□□□□ -0.77
USE1-201ENST00000263897 CSDC2Q9Y534 153 aaKnown RBP10.25□□□□□ -0.77
USE1-201ENST00000263897 S100A8P05109 93 aa10.24□□□□□ -0.77
USE1-201ENST00000263897 CKS2P33552 79 aa10.24□□□□□ -0.77
USE1-201ENST00000263897 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
USE1-201ENST00000263897 MRPL54Q6P161 138 aaKnown RBP10.24□□□□□ -0.77
USE1-201ENST00000263897 A0A1B0GXF2 115 aa10.23□□□□□ -0.77
USE1-201ENST00000263897 CHTF8P0CG12 524 aa10.23□□□□□ -0.77
USE1-201ENST00000263897 RPL32P62910 135 aaKnown RBP10.23□□□□□ -0.77
USE1-201ENST00000263897 HBBP68871 147 aa10.23□□□□□ -0.77
USE1-201ENST00000263897 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
USE1-201ENST00000263897 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
USE1-201ENST00000263897 UBE2D4Q9Y2X8 147 aa10.23□□□□□ -0.77
USE1-201ENST00000263897 A0A087WYN8 130 aa10.22□□□□□ -0.77
USE1-201ENST00000263897 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
USE1-201ENST00000263897 F8W036 122 aa10.22□□□□□ -0.77
USE1-201ENST00000263897 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
USE1-201ENST00000263897 COX6A2Q02221 97 aa10.22□□□□□ -0.77
USE1-201ENST00000263897 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
USE1-201ENST00000263897 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
USE1-201ENST00000263897 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
USE1-201ENST00000263897 TMEM18Q96B42 140 aa10.21□□□□□ -0.77
USE1-201ENST00000263897 TIMM21Q9BVV7 248 aa10.21□□□□□ -0.77
USE1-201ENST00000263897 D6R8Y8 96 aa10.2□□□□□ -0.78
USE1-201ENST00000263897 TCAPO15273 167 aa10.2□□□□□ -0.78
USE1-201ENST00000263897 RAB14P61106 215 aa10.2□□□□□ -0.78
USE1-201ENST00000263897 PPBPP02775 128 aa10.19□□□□□ -0.78
USE1-201ENST00000263897 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
USE1-201ENST00000263897 SMIM2Q9BVW6 85 aa10.19□□□□□ -0.78
USE1-201ENST00000263897 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
USE1-201ENST00000263897 PHOX2AO14813 284 aa10.18□□□□□ -0.78
USE1-201ENST00000263897 OXTP01178 125 aa10.18□□□□□ -0.78
USE1-201ENST00000263897 NPYP01303 97 aa10.18□□□□□ -0.78
USE1-201ENST00000263897 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
USE1-201ENST00000263897 ATP5L2Q7Z4Y8 100 aa10.18□□□□□ -0.78
USE1-201ENST00000263897 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
USE1-201ENST00000263897 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
USE1-201ENST00000263897 HNRNPA3P51991 378 aaKnown RBP10.17□□□□□ -0.78
USE1-201ENST00000263897 PNRC1Q12796 327 aaPredicted RBP10.17□□□□□ -0.78
USE1-201ENST00000263897 IGKV2-24A0A0C4DH68 120 aa10.16□□□□□ -0.78
USE1-201ENST00000263897 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
USE1-201ENST00000263897 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
USE1-201ENST00000263897 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
USE1-201ENST00000263897 Q6ZUT4 128 aa10.16□□□□□ -0.78
USE1-201ENST00000263897 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
USE1-201ENST00000263897 COX7A2LO14548 114 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 MT-ND4LP03901 98 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 MALP21145 153 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 FAM104AQ969W3 186 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 CARD19Q96LW7 228 aa10.15□□□□□ -0.78
USE1-201ENST00000263897 A0A096LNI7 61 aa10.14□□□□□ -0.79
USE1-201ENST00000263897 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
USE1-201ENST00000263897 SPANXA1Q9NS26 97 aa10.14□□□□□ -0.79
USE1-201ENST00000263897 PKIGQ9Y2B9 76 aa10.14□□□□□ -0.79
USE1-201ENST00000263897 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
USE1-201ENST00000263897 CLLU1Q5K131 121 aa10.13□□□□□ -0.79
USE1-201ENST00000263897 C5orf38Q86SI9 138 aa10.13□□□□□ -0.79
USE1-201ENST00000263897 STPG4Q8N801 248 aa10.13□□□□□ -0.79
USE1-201ENST00000263897 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
USE1-201ENST00000263897 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
USE1-201ENST00000263897 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
USE1-201ENST00000263897 RAB5AP20339 215 aa10.12□□□□□ -0.79
USE1-201ENST00000263897 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
USE1-201ENST00000263897 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
USE1-201ENST00000263897 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
USE1-201ENST00000263897 APOMO95445 188 aa10.1□□□□□ -0.79
USE1-201ENST00000263897 Q6ZRU5 148 aa10.1□□□□□ -0.79
USE1-201ENST00000263897 LAMTOR2Q9Y2Q5 125 aa10.1□□□□□ -0.79
USE1-201ENST00000263897 C2orf48Q96LS8 159 aa10.09□□□□□ -0.79
USE1-201ENST00000263897 CAMK2N2Q96S95 79 aa10.09□□□□□ -0.79
USE1-201ENST00000263897 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
USE1-201ENST00000263897 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
USE1-201ENST00000263897 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms