RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 FHL3Q13643 280 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 ESM1Q9NQ30 184 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 RPL36AP83881 106 aaKnown RBP10.35□□□□□ -0.75
TUBGCP3-201ENST00000261965 RPL36ALQ969Q0 106 aaKnown RBP10.35□□□□□ -0.75
TUBGCP3-201ENST00000261965 M0QY20 66 aa10.35□□□□□ -0.75
TUBGCP3-201ENST00000261965 IGIPA6NJ69 53 aa10.35□□□□□ -0.75
TUBGCP3-201ENST00000261965 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
TUBGCP3-201ENST00000261965 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 FBN2P35556 2912 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 LINC00467Q9BRT7 94 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 TRBV10-2A0A0K0K1G8 114 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 A6NDX4 124 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 C6orf226Q5I0X4 101 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 C10orf105Q8TEF2 133 aa10.34□□□□□ -0.75
TUBGCP3-201ENST00000261965 B4DSR2 109 aa10.33□□□□□ -0.75
TUBGCP3-201ENST00000261965 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 A0A0J9YX75 114 aa10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 TEX15Q9BXT5 2789 aa10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 TMEM61Q8N0U2 210 aa10.33□□□□□ -0.76
TUBGCP3-201ENST00000261965 LINC00315P59091 139 aa10.32□□□□□ -0.76
TUBGCP3-201ENST00000261965 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
TUBGCP3-201ENST00000261965 CITED1Q99966 193 aa10.32□□□□□ -0.76
TUBGCP3-201ENST00000261965 RHOHQ15669 191 aa10.31□□□□□ -0.76
TUBGCP3-201ENST00000261965 SLPIP03973 132 aa10.31□□□□□ -0.76
TUBGCP3-201ENST00000261965 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
TUBGCP3-201ENST00000261965 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
TUBGCP3-201ENST00000261965 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
TUBGCP3-201ENST00000261965 GCN1Q92616 2671 aaKnown RBP10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 NF1P21359 2839 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 UBE2D3P61077 147 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 UBE2D2P62837 147 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 XCL1P47992 114 aa10.3□□□□□ -0.76
TUBGCP3-201ENST00000261965 KLLNB2CW77 178 aa10.29□□□□□ -0.76
TUBGCP3-201ENST00000261965 INSP01308 110 aa10.29□□□□□ -0.76
TUBGCP3-201ENST00000261965 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
TUBGCP3-201ENST00000261965 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
TUBGCP3-201ENST00000261965 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 MXRA5Q9NR99 2828 aa10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 H7C423 109 aa10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
TUBGCP3-201ENST00000261965 COX6B1P14854 86 aa10.27□□□□□ -0.77
TUBGCP3-201ENST00000261965 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.77
TUBGCP3-201ENST00000261965 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.77
TUBGCP3-201ENST00000261965 KLK5Q9Y337 293 aaPredicted RBP10.27□□□□□ -0.77
TUBGCP3-201ENST00000261965 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
TUBGCP3-201ENST00000261965 PEMTQ9UBM1 199 aa10.26□□□□□ -0.77
TUBGCP3-201ENST00000261965 LECT2O14960 151 aa10.25□□□□□ -0.77
TUBGCP3-201ENST00000261965 IGLV1-40P01703 118 aa10.25□□□□□ -0.77
TUBGCP3-201ENST00000261965 MIAQ16674 131 aa10.25□□□□□ -0.77
TUBGCP3-201ENST00000261965 Q6ZTI0 123 aa10.25□□□□□ -0.77
TUBGCP3-201ENST00000261965 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
TUBGCP3-201ENST00000261965 Q6ZSN1 163 aa10.25□□□□□ -0.77
TUBGCP3-201ENST00000261965 DEFB4AO15263 64 aa10.24□□□□□ -0.77
TUBGCP3-201ENST00000261965 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
TUBGCP3-201ENST00000261965 A0A0B4J2C4 111 aa10.24□□□□□ -0.77
TUBGCP3-201ENST00000261965 FAM19A4Q96LR4 140 aa10.24□□□□□ -0.77
TUBGCP3-201ENST00000261965 K7EQG2 157 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RBMY1A1P0DJD3 496 aaKnown RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RBMY1CP0DJD4 496 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 MED14OSP0DP75 135 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 PSMB8P28062 276 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RBMY1FQ15415 496 aaKnown RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 MALP21145 153 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 COPS9Q8WXC6 57 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RBMY1DP0C7P1 496 aaKnown RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 RPL32P62910 135 aaKnown RBP10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
TUBGCP3-201ENST00000261965 A0A1B0GX51 115 aa10.22□□□□□ -0.77
TUBGCP3-201ENST00000261965 H3BUA1 57 aa10.22□□□□□ -0.77
TUBGCP3-201ENST00000261965 HAMPP81172 84 aa10.22□□□□□ -0.77
TUBGCP3-201ENST00000261965 HECTD1Q9ULT8 2610 aa10.22□□□□□ -0.77
TUBGCP3-201ENST00000261965 S100A7L2Q5SY68 101 aa10.22□□□□□ -0.77
TUBGCP3-201ENST00000261965 FLNAP21333 2647 aaKnown RBP10.21□□□□□ -0.77
TUBGCP3-201ENST00000261965 LOC100131303A0A0U1RQF7 123 aa10.21□□□□□ -0.77
TUBGCP3-201ENST00000261965 HERVK_113P63121 156 aa10.21□□□□□ -0.77
TUBGCP3-201ENST00000261965 TMEM243Q9BU79 118 aa10.21□□□□□ -0.77
TUBGCP3-201ENST00000261965 COX6A2Q02221 97 aa10.21□□□□□ -0.78
TUBGCP3-201ENST00000261965 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.78
TUBGCP3-201ENST00000261965 C9orf85Q96MD7 179 aa10.21□□□□□ -0.78
TUBGCP3-201ENST00000261965 PLA2G2AP14555 144 aa10.2□□□□□ -0.78
TUBGCP3-201ENST00000261965 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
TUBGCP3-201ENST00000261965 K7EMT4 169 aa10.2□□□□□ -0.78
TUBGCP3-201ENST00000261965 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
TUBGCP3-201ENST00000261965 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
TUBGCP3-201ENST00000261965 WFDC9Q8NEX5 89 aa10.2□□□□□ -0.78
TUBGCP3-201ENST00000261965 LINC01619G3V211 115 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms