RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 ELANEP08246 267 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 SLURP1P55000 103 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 GPHB5Q86YW7 130 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 PRO0461Q9UI25 63 aa12.09□□□□□ -0.47
SREBF1-201ENST00000261646 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.47
SREBF1-201ENST00000261646 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.47
SREBF1-201ENST00000261646 A0A096LPF7 62 aa12.08□□□□□ -0.48
SREBF1-201ENST00000261646 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
SREBF1-201ENST00000261646 PCSK5Q92824 1860 aa12.08□□□□□ -0.48
SREBF1-201ENST00000261646 HIST2H2BCQ6DN03 193 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 HIST2H2BDQ6DRA6 164 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 COX7B2Q8TF08 81 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 PSMG3-AS1Q96PY0 264 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 Q6ZSV7 163 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 DSCR8Q96T75 97 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 PRRC2AP48634 2157 aaKnown RBP12.07□□□□□ -0.48
SREBF1-201ENST00000261646 TSHBP01222 138 aa12.07□□□□□ -0.48
SREBF1-201ENST00000261646 IGHV4-30-2A0A087WSY4 118 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 Q8N6K4 173 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 NDUFA7O95182 113 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 PRB1P04280 392 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 DSCR9P59020 149 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 Q6Q795 121 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 SVIPQ8NHG7 77 aa12.06□□□□□ -0.48
SREBF1-201ENST00000261646 C1orf43Q9BWL3 253 aa12.05□□□□□ -0.48
SREBF1-201ENST00000261646 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
SREBF1-201ENST00000261646 ACANP16112 2415 aa12.04□□□□□ -0.48
SREBF1-201ENST00000261646 CMC4P56277 68 aaPredicted RBP12.04□□□□□ -0.48
SREBF1-201ENST00000261646 EPG5Q9HCE0 2579 aa12.04□□□□□ -0.48
SREBF1-201ENST00000261646 CRYGDP07320 174 aa12.04□□□□□ -0.48
SREBF1-201ENST00000261646 LMO4P61968 165 aa12.04□□□□□ -0.48
SREBF1-201ENST00000261646 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
SREBF1-201ENST00000261646 POM121L12Q8N7R1 296 aa12.03□□□□□ -0.48
SREBF1-201ENST00000261646 K7EQD1 137 aa12.02□□□□□ -0.48
SREBF1-201ENST00000261646 IMUPQ9GZP8 106 aa12.02□□□□□ -0.48
SREBF1-201ENST00000261646 ZNF462Q96JM2 2506 aa12.02□□□□□ -0.49
SREBF1-201ENST00000261646 C19orf84I3L1E1 186 aa12.02□□□□□ -0.49
SREBF1-201ENST00000261646 PSMB8P28062 276 aa12.02□□□□□ -0.49
SREBF1-201ENST00000261646 C20orf197Q8N268 126 aa12.01□□□□□ -0.49
SREBF1-201ENST00000261646 KLLNB2CW77 178 aa12.01□□□□□ -0.49
SREBF1-201ENST00000261646 K7EQG2 157 aa12.01□□□□□ -0.49
SREBF1-201ENST00000261646 LINC00694P0DN24 101 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
SREBF1-201ENST00000261646 SLPIP03973 132 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 TRAV25A0A0B4J276 109 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 NDUFA1O15239 70 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 PRM2P04554 102 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 MRAPQ8TCY5 172 aa12□□□□□ -0.49
SREBF1-201ENST00000261646 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
SREBF1-201ENST00000261646 TIRAPP58753 221 aa11.99□□□□□ -0.49
SREBF1-201ENST00000261646 CFAP47Q6ZTR5 3102 aa11.99□□□□□ -0.49
SREBF1-201ENST00000261646 JMJD7-PLA2G4BH0Y9G9 81 aa11.98□□□□□ -0.49
SREBF1-201ENST00000261646 M0QXV9 152 aa11.98□□□□□ -0.49
SREBF1-201ENST00000261646 IGLV10-54A0A075B6I4 117 aa11.98□□□□□ -0.49
SREBF1-201ENST00000261646 C5orf47Q569G3 176 aa11.98□□□□□ -0.49
SREBF1-201ENST00000261646 VPREB3Q9UKI3 123 aa11.98□□□□□ -0.49
SREBF1-201ENST00000261646 ADGRG4Q8IZF6 3080 aa11.98□□□□□ -0.49
SREBF1-201ENST00000261646 A6NDX4 124 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 ADAMTSL4-AS1Q5T5F5 129 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 FAM240AA0A1B0GVK7 77 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 NCR3O14931 201 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 COX7CP15954 63 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
SREBF1-201ENST00000261646 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
SREBF1-201ENST00000261646 RAI1Q7Z5J4 1906 aaPredicted RBP11.95□□□□□ -0.5
SREBF1-201ENST00000261646 C9orf85Q96MD7 179 aa11.95□□□□□ -0.5
SREBF1-201ENST00000261646 C10orf99Q6UWK7 81 aa11.95□□□□□ -0.5
SREBF1-201ENST00000261646 LINC01546A6NGU7 62 aa11.94□□□□□ -0.5
SREBF1-201ENST00000261646 TIMM17BO60830 172 aa11.94□□□□□ -0.5
SREBF1-201ENST00000261646 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
SREBF1-201ENST00000261646 ZNF292O60281 2723 aa11.94□□□□□ -0.5
SREBF1-201ENST00000261646 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 LOC400499M0QZD8 3231 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 DOPEY1Q5JWR5 2465 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 Q6ZTI0 123 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 FAM110AQ9BQ89 295 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 WDFY3Q8IZQ1 3526 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 C10orf105Q8TEF2 133 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 KLK5Q9Y337 293 aaPredicted RBP11.93□□□□□ -0.5
SREBF1-201ENST00000261646 RPL18AQ02543 176 aaKnown RBP11.93□□□□□ -0.5
SREBF1-201ENST00000261646 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
SREBF1-201ENST00000261646 SERP2Q8N6R1 65 aa11.92□□□□□ -0.5
SREBF1-201ENST00000261646 TRBV10-1A0A0K0K1A3 114 aa11.92□□□□□ -0.5
SREBF1-201ENST00000261646 F5H768 121 aa11.92□□□□□ -0.5
SREBF1-201ENST00000261646 TMEM256-PLSCR3K7ERE1 68 aa11.91□□□□□ -0.5
SREBF1-201ENST00000261646 EDN2P20800 178 aa11.91□□□□□ -0.5
SREBF1-201ENST00000261646 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
SREBF1-201ENST00000261646 DCANP1Q8TF63 244 aa11.91□□□□□ -0.5
SREBF1-201ENST00000261646 TMEM258P61165 79 aa11.9□□□□□ -0.5
SREBF1-201ENST00000261646 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
SREBF1-201ENST00000261646 GYPEP15421 78 aa11.9□□□□□ -0.5
SREBF1-201ENST00000261646 AKAP13Q12802 2813 aa11.9□□□□□ -0.5
SREBF1-201ENST00000261646 DAD1P61803 113 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms