RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 LINC01600Q96MT4 127 aa11.69□□□□□ -0.54
PAX3-201ENST00000258387 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
PAX3-201ENST00000258387 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
PAX3-201ENST00000258387 CDC42SE2Q9NRR3 84 aa11.67□□□□□ -0.54
PAX3-201ENST00000258387 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
PAX3-201ENST00000258387 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
PAX3-201ENST00000258387 ALKAL2Q6UX46 152 aa11.66□□□□□ -0.54
PAX3-201ENST00000258387 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
PAX3-201ENST00000258387 LRP2P98164 4655 aa11.66□□□□□ -0.54
PAX3-201ENST00000258387 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 RAB4AP20338 218 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
PAX3-201ENST00000258387 SYCNQ0VAF6 134 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 CT83Q5H943 113 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 PKIGQ9Y2B9 76 aa11.65□□□□□ -0.54
PAX3-201ENST00000258387 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
PAX3-201ENST00000258387 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
PAX3-201ENST00000258387 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
PAX3-201ENST00000258387 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
PAX3-201ENST00000258387 SPINK6Q6UWN8 80 aa11.63□□□□□ -0.55
PAX3-201ENST00000258387 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
PAX3-201ENST00000258387 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
PAX3-201ENST00000258387 A0A0J9YXV3 536 aa11.62□□□□□ -0.55
PAX3-201ENST00000258387 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
PAX3-201ENST00000258387 C7orf77A4D0Y5 90 aa11.62□□□□□ -0.55
PAX3-201ENST00000258387 MALP21145 153 aa11.62□□□□□ -0.55
PAX3-201ENST00000258387 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
PAX3-201ENST00000258387 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
PAX3-201ENST00000258387 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
PAX3-201ENST00000258387 IGLV4-69A0A075B6H9 119 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 VCYO14598 125 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 FCER1GP30273 86 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 CAMPP49913 170 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
PAX3-201ENST00000258387 Q6ZRP5 223 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 LINC01551Q86U37 167 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
PAX3-201ENST00000258387 RNF213Q63HN8 5207 aa11.6□□□□□ -0.55
PAX3-201ENST00000258387 PTTG1IPP53801 180 aa11.6□□□□□ -0.55
PAX3-201ENST00000258387 KRTAP10-8P60410 259 aa11.6□□□□□ -0.55
PAX3-201ENST00000258387 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
PAX3-201ENST00000258387 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
PAX3-201ENST00000258387 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
PAX3-201ENST00000258387 C1orf196B1AJZ1 125 aa11.59□□□□□ -0.55
PAX3-201ENST00000258387 COX7A2LO14548 114 aa11.59□□□□□ -0.55
PAX3-201ENST00000258387 ISOC2Q96AB3 205 aa11.59□□□□□ -0.55
PAX3-201ENST00000258387 OSTCQ9NRP0 149 aa11.59□□□□□ -0.55
PAX3-201ENST00000258387 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
PAX3-201ENST00000258387 A0A1W2PNN7 141 aa11.58□□□□□ -0.56
PAX3-201ENST00000258387 RIGQ13278 110 aa11.58□□□□□ -0.56
PAX3-201ENST00000258387 C5orf38Q86SI9 138 aa11.57□□□□□ -0.56
PAX3-201ENST00000258387 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
PAX3-201ENST00000258387 NUP35Q8NFH5 326 aa11.57□□□□□ -0.56
PAX3-201ENST00000258387 CAMK2N2Q96S95 79 aa11.57□□□□□ -0.56
PAX3-201ENST00000258387 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
PAX3-201ENST00000258387 NRACQ8N912 160 aa11.56□□□□□ -0.56
PAX3-201ENST00000258387 UBE2D4Q9Y2X8 147 aa11.56□□□□□ -0.56
PAX3-201ENST00000258387 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
PAX3-201ENST00000258387 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
PAX3-201ENST00000258387 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
PAX3-201ENST00000258387 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
PAX3-201ENST00000258387 V9GYV3 84 aa11.55□□□□□ -0.56
PAX3-201ENST00000258387 hCG_2014768A0A024R1R8 64 aa11.54□□□□□ -0.56
PAX3-201ENST00000258387 APOMO95445 188 aa11.54□□□□□ -0.56
PAX3-201ENST00000258387 PPP1R17O96001 155 aa11.54□□□□□ -0.56
PAX3-201ENST00000258387 OPRPNQ99935 248 aaPredicted RBP11.54□□□□□ -0.56
PAX3-201ENST00000258387 RPL18AQ02543 176 aaKnown RBP11.53□□□□□ -0.56
PAX3-201ENST00000258387 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
PAX3-201ENST00000258387 Q6ZUT4 128 aa11.53□□□□□ -0.56
PAX3-201ENST00000258387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.57
PAX3-201ENST00000258387 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
PAX3-201ENST00000258387 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
PAX3-201ENST00000258387 MT-ND6P03923 174 aa11.51□□□□□ -0.57
PAX3-201ENST00000258387 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
PAX3-201ENST00000258387 NAT8BQ9UHF3 227 aa11.51□□□□□ -0.57
PAX3-201ENST00000258387 PSORS1C2Q9UIG4 136 aa11.51□□□□□ -0.57
PAX3-201ENST00000258387 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
PAX3-201ENST00000258387 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
PAX3-201ENST00000258387 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
PAX3-201ENST00000258387 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
PAX3-201ENST00000258387 TMEM18Q96B42 140 aa11.5□□□□□ -0.57
PAX3-201ENST00000258387 CKS2P33552 79 aa11.48□□□□□ -0.57
PAX3-201ENST00000258387 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
PAX3-201ENST00000258387 RPL39P62891 51 aaKnown RBP11.48□□□□□ -0.57
PAX3-201ENST00000258387 ADIRFQ15847 76 aa11.48□□□□□ -0.57
PAX3-201ENST00000258387 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
PAX3-201ENST00000258387 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
PAX3-201ENST00000258387 FAM74A3Q4VXF1 159 aa11.47□□□□□ -0.57
PAX3-201ENST00000258387 C20orf78Q9BR46 151 aa11.47□□□□□ -0.57
PAX3-201ENST00000258387 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
PAX3-201ENST00000258387 SMIM27A0A1W2PRY6 76 aa11.45□□□□□ -0.58
PAX3-201ENST00000258387 LINC00862A6NCI5 91 aa11.45□□□□□ -0.58
PAX3-201ENST00000258387 TNFRSF6BO95407 300 aa11.45□□□□□ -0.58
PAX3-201ENST00000258387 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
PAX3-201ENST00000258387 TRBV24-1A0A075B6N3 115 aa11.44□□□□□ -0.58
PAX3-201ENST00000258387 C9JQL5 133 aa11.44□□□□□ -0.58
PAX3-201ENST00000258387 OR10D4PQ8NGN7 298 aa11.44□□□□□ -0.58
PAX3-201ENST00000258387 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms