RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
HOXC12-201ENST00000243103 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
HOXC12-201ENST00000243103 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
HOXC12-201ENST00000243103 ZFAND3Q9H8U3 227 aa11.1□□□□□ -0.63
HOXC12-201ENST00000243103 KAAG1Q9UBP8 84 aa11.1□□□□□ -0.63
HOXC12-201ENST00000243103 NCR3O14931 201 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 TMEM141Q96I45 108 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 PSMG3-AS1Q96PY0 264 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 ITPR3Q14573 2671 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 PIMREGQ9BSJ6 248 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 IGHV3-53P01767 116 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
HOXC12-201ENST00000243103 LINC00643Q86TS7 51 aa11.09□□□□□ -0.63
HOXC12-201ENST00000243103 GNLYP22749 145 aa11.08□□□□□ -0.64
HOXC12-201ENST00000243103 TMEM61Q8N0U2 210 aa11.08□□□□□ -0.64
HOXC12-201ENST00000243103 FAM19A4Q96LR4 140 aa11.08□□□□□ -0.64
HOXC12-201ENST00000243103 LY6LH3BQJ8 138 aa11.08□□□□□ -0.64
HOXC12-201ENST00000243103 OVOL1O14753 267 aa11.08□□□□□ -0.64
HOXC12-201ENST00000243103 OXTP01178 125 aa11.08□□□□□ -0.64
HOXC12-201ENST00000243103 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 POLR2KP53803 58 aaKnown RBP11.07□□□□□ -0.64
HOXC12-201ENST00000243103 RHPN1-AS1Q9BWJ2 59 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 PRB2P02812 416 aaPredicted RBP11.07□□□□□ -0.64
HOXC12-201ENST00000243103 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 FAM218AQ96MZ4 157 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 H3BUX3 64 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 EBI3Q14213 229 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 RNF5Q99942 180 aa11.07□□□□□ -0.64
HOXC12-201ENST00000243103 RPL35AP18077 110 aaKnown RBP11.06□□□□□ -0.64
HOXC12-201ENST00000243103 PFN2P35080 140 aa11.06□□□□□ -0.64
HOXC12-201ENST00000243103 Q8N9W7 124 aa11.06□□□□□ -0.64
HOXC12-201ENST00000243103 UBR5O95071 2799 aaPredicted RBP11.06□□□□□ -0.64
HOXC12-201ENST00000243103 C20orf203Q8NBC4 194 aa11.05□□□□□ -0.64
HOXC12-201ENST00000243103 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
HOXC12-201ENST00000243103 MIAQ16674 131 aa11.05□□□□□ -0.64
HOXC12-201ENST00000243103 S100A7L2Q5SY68 101 aa11.05□□□□□ -0.64
HOXC12-201ENST00000243103 SNURFQ9Y675 71 aa11.05□□□□□ -0.64
HOXC12-201ENST00000243103 K7ENP7 123 aa11.04□□□□□ -0.64
HOXC12-201ENST00000243103 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
HOXC12-201ENST00000243103 TRBV7-7A0A0K0K1E9 115 aa11.04□□□□□ -0.64
HOXC12-201ENST00000243103 DEFB136Q30KP8 78 aa11.04□□□□□ -0.64
HOXC12-201ENST00000243103 NPBQ8NG41 125 aa11.04□□□□□ -0.64
HOXC12-201ENST00000243103 F8P00451 2351 aa11.03□□□□□ -0.64
HOXC12-201ENST00000243103 FLNBO75369 2602 aaKnown RBP11.03□□□□□ -0.64
HOXC12-201ENST00000243103 IGHV1-69DA0A0B4J2H0 117 aa11.03□□□□□ -0.64
HOXC12-201ENST00000243103 MRAPQ8TCY5 172 aa11.03□□□□□ -0.64
HOXC12-201ENST00000243103 IGHV4-4A0A075B6R2 117 aa11.02□□□□□ -0.64
HOXC12-201ENST00000243103 C9orf139Q6ZV77 190 aa11.02□□□□□ -0.64
HOXC12-201ENST00000243103 BRK1Q8WUW1 75 aa11.02□□□□□ -0.65
HOXC12-201ENST00000243103 TMEM243Q9BU79 118 aa11.02□□□□□ -0.65
HOXC12-201ENST00000243103 USP17L23D6RBM5 183 aa11.02□□□□□ -0.65
HOXC12-201ENST00000243103 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.65
HOXC12-201ENST00000243103 IGHV1-58A0A0C4DH39 117 aa11.01□□□□□ -0.65
HOXC12-201ENST00000243103 LINC00315P59091 139 aa11.01□□□□□ -0.65
HOXC12-201ENST00000243103 LRRC75A-AS1Q8N1F1 130 aa11.01□□□□□ -0.65
HOXC12-201ENST00000243103 LECT2O14960 151 aa11.01□□□□□ -0.65
HOXC12-201ENST00000243103 LINC00846Q9NV44 126 aa11.01□□□□□ -0.65
HOXC12-201ENST00000243103 M0QY20 66 aa11.01□□□□□ -0.65
HOXC12-201ENST00000243103 IGHV4-61A0A0C4DH41 118 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 ATOX1O00244 68 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 GHRHP01286 108 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 LINC00158P58513 81 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 TMEM190Q8WZ59 177 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
HOXC12-201ENST00000243103 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 ITLN2Q8WWU7 325 aaPredicted RBP10.99□□□□□ -0.65
HOXC12-201ENST00000243103 LITAFQ99732 161 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 NBPF19A0A087WUL8 3843 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 FAM223BA6NKX1 122 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 LINC00308Q8TCZ7 52 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 A0A1W2PRX2 142 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 COX6A2Q02221 97 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 IGF2-ASQ6U949 168 aa10.99□□□□□ -0.65
HOXC12-201ENST00000243103 ENHOQ6UWT2 76 aa10.98□□□□□ -0.65
HOXC12-201ENST00000243103 PAX4O43316 350 aa10.98□□□□□ -0.65
HOXC12-201ENST00000243103 MALP21145 153 aa10.98□□□□□ -0.65
HOXC12-201ENST00000243103 LINC00467Q9BRT7 94 aa10.98□□□□□ -0.65
HOXC12-201ENST00000243103 RPL18AQ02543 176 aaKnown RBP10.97□□□□□ -0.65
HOXC12-201ENST00000243103 LINC00336Q6ZUF6 198 aa10.97□□□□□ -0.65
HOXC12-201ENST00000243103 A0A087WYN8 130 aa10.97□□□□□ -0.65
HOXC12-201ENST00000243103 COX7A2LO14548 114 aa10.97□□□□□ -0.65
HOXC12-201ENST00000243103 RPL36AP83881 106 aaKnown RBP10.97□□□□□ -0.65
HOXC12-201ENST00000243103 FHL2Q14192 279 aa10.97□□□□□ -0.65
HOXC12-201ENST00000243103 RPL36ALQ969Q0 106 aaKnown RBP10.97□□□□□ -0.65
HOXC12-201ENST00000243103 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
HOXC12-201ENST00000243103 CFHR3Q02985 330 aa10.96□□□□□ -0.65
HOXC12-201ENST00000243103 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.65
HOXC12-201ENST00000243103 KIF25-AS1Q9Y6Z4 181 aa10.96□□□□□ -0.65
HOXC12-201ENST00000243103 TRBV27A0A0K0K1C4 114 aa10.96□□□□□ -0.66
HOXC12-201ENST00000243103 SCXQ7RTU7 201 aa10.96□□□□□ -0.66
HOXC12-201ENST00000243103 FAM110DQ8TAY7 271 aaPredicted RBP10.96□□□□□ -0.66
HOXC12-201ENST00000243103 CRPP02741 224 aa10.96□□□□□ -0.66
HOXC12-201ENST00000243103 CXCL5P42830 114 aa10.96□□□□□ -0.66
HOXC12-201ENST00000243103 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
HOXC12-201ENST00000243103 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms