RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 PHOX2AO14813 284 aa10.86□□□□□ -0.67
CLTA-201ENST00000242285 PPBPP02775 128 aa10.86□□□□□ -0.67
CLTA-201ENST00000242285 MT-ND4LP03901 98 aa10.86□□□□□ -0.67
CLTA-201ENST00000242285 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
CLTA-201ENST00000242285 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
CLTA-201ENST00000242285 CSDC2Q9Y534 153 aaKnown RBP10.86□□□□□ -0.67
CLTA-201ENST00000242285 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
CLTA-201ENST00000242285 CKS2P33552 79 aa10.85□□□□□ -0.67
CLTA-201ENST00000242285 LINC01620Q4KN68 170 aa10.85□□□□□ -0.67
CLTA-201ENST00000242285 MRPL54Q6P161 138 aaKnown RBP10.85□□□□□ -0.67
CLTA-201ENST00000242285 UQCC3Q6UW78 93 aa10.85□□□□□ -0.67
CLTA-201ENST00000242285 FCER1GP30273 86 aa10.84□□□□□ -0.67
CLTA-201ENST00000242285 IFITM2Q01629 132 aa10.84□□□□□ -0.67
CLTA-201ENST00000242285 CFAP161Q6P656 301 aa10.84□□□□□ -0.67
CLTA-201ENST00000242285 CHCHD10Q8WYQ3 142 aaPredicted RBP10.84□□□□□ -0.67
CLTA-201ENST00000242285 CHAC1Q9BUX1 264 aa10.84□□□□□ -0.67
CLTA-201ENST00000242285 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
CLTA-201ENST00000242285 HAMPP81172 84 aa10.83□□□□□ -0.68
CLTA-201ENST00000242285 GAGE12HA6NDE8 117 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 D6R8Y8 96 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 CCL25O15444 150 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 PLA2G1BP04054 148 aaKnown RBP10.82□□□□□ -0.68
CLTA-201ENST00000242285 SCXQ7RTU7 201 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 TMEM18Q96B42 140 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 AP5S1Q9NUS5 200 aa10.82□□□□□ -0.68
CLTA-201ENST00000242285 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.81□□□□□ -0.68
CLTA-201ENST00000242285 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
CLTA-201ENST00000242285 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
CLTA-201ENST00000242285 hDV102S1A0JD36 115 aa10.81□□□□□ -0.68
CLTA-201ENST00000242285 ZNF664Q8N3J9 261 aa10.81□□□□□ -0.68
CLTA-201ENST00000242285 C15orf56Q8N910 161 aa10.81□□□□□ -0.68
CLTA-201ENST00000242285 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
CLTA-201ENST00000242285 FOXI1Q12951 378 aa10.8□□□□□ -0.68
CLTA-201ENST00000242285 ORMDL3Q8N138 153 aa10.8□□□□□ -0.68
CLTA-201ENST00000242285 IMMP2LQ96T52 175 aa10.8□□□□□ -0.68
CLTA-201ENST00000242285 LAMTOR2Q9Y2Q5 125 aa10.8□□□□□ -0.68
CLTA-201ENST00000242285 UBE2D4Q9Y2X8 147 aa10.8□□□□□ -0.68
CLTA-201ENST00000242285 GVQW2A0A096LPI5 108 aaPredicted RBP10.78□□□□□ -0.68
CLTA-201ENST00000242285 TMEM218A2RU14 115 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 NPYP01303 97 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 SS18Q15532 418 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 TMEM136Q6ZRR5 245 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 CIRBP-AS1Q8TBR5 109 aa10.78□□□□□ -0.68
CLTA-201ENST00000242285 SLPIP03973 132 aa10.77□□□□□ -0.69
CLTA-201ENST00000242285 ADCYAP1P18509 176 aa10.77□□□□□ -0.69
CLTA-201ENST00000242285 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
CLTA-201ENST00000242285 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
CLTA-201ENST00000242285 LINC00528Q8N1L1 170 aa10.77□□□□□ -0.69
CLTA-201ENST00000242285 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
CLTA-201ENST00000242285 C1orf196B1AJZ1 125 aa10.76□□□□□ -0.69
CLTA-201ENST00000242285 J3QL48 77 aa10.76□□□□□ -0.69
CLTA-201ENST00000242285 PRELID3AQ96N28 172 aa10.76□□□□□ -0.69
CLTA-201ENST00000242285 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
CLTA-201ENST00000242285 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
CLTA-201ENST00000242285 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
CLTA-201ENST00000242285 IGHV3-64A0A075B6Q5 118 aa10.75□□□□□ -0.69
CLTA-201ENST00000242285 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
CLTA-201ENST00000242285 IGHV1-58A0A0C4DH39 117 aa10.75□□□□□ -0.69
CLTA-201ENST00000242285 XCL1P47992 114 aa10.75□□□□□ -0.69
CLTA-201ENST00000242285 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
CLTA-201ENST00000242285 RAB5AP20339 215 aa10.72□□□□□ -0.69
CLTA-201ENST00000242285 RPL39P62891 51 aaKnown RBP10.72□□□□□ -0.69
CLTA-201ENST00000242285 Q6ZUT4 128 aa10.72□□□□□ -0.69
CLTA-201ENST00000242285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
CLTA-201ENST00000242285 K7EMI3 77 aa10.71□□□□□ -0.69
CLTA-201ENST00000242285 HIGD2BQ4VC39 106 aa10.71□□□□□ -0.69
CLTA-201ENST00000242285 MAP1LC3AQ9H492 121 aa10.71□□□□□ -0.69
CLTA-201ENST00000242285 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
CLTA-201ENST00000242285 PYGO1Q9Y3Y4 419 aa10.71□□□□□ -0.69
CLTA-201ENST00000242285 C10orf91Q5T1B1 145 aa10.7□□□□□ -0.7
CLTA-201ENST00000242285 COMMD7Q86VX2 200 aa10.7□□□□□ -0.7
CLTA-201ENST00000242285 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
CLTA-201ENST00000242285 COX7A2LO14548 114 aa10.69□□□□□ -0.7
CLTA-201ENST00000242285 Q8N8P6 123 aa10.69□□□□□ -0.7
CLTA-201ENST00000242285 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
CLTA-201ENST00000242285 PANO1I0J062 215 aa10.68□□□□□ -0.7
CLTA-201ENST00000242285 KRTAP10-4P60372 401 aaPredicted RBP10.68□□□□□ -0.7
CLTA-201ENST00000242285 RNASE13Q5GAN3 156 aaKnown RBP10.68□□□□□ -0.7
CLTA-201ENST00000242285 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
CLTA-201ENST00000242285 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
CLTA-201ENST00000242285 IFI27P40305 119 aaPredicted RBP10.67□□□□□ -0.7
CLTA-201ENST00000242285 CARHSP1Q9Y2V2 147 aaKnown RBP10.67□□□□□ -0.7
CLTA-201ENST00000242285 NPSP0C0P6 89 aa10.66□□□□□ -0.7
CLTA-201ENST00000242285 MALP21145 153 aa10.66□□□□□ -0.7
CLTA-201ENST00000242285 S100PP25815 95 aa10.66□□□□□ -0.7
CLTA-201ENST00000242285 COX19Q49B96 90 aa10.66□□□□□ -0.7
CLTA-201ENST00000242285 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
CLTA-201ENST00000242285 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
CLTA-201ENST00000242285 NXT2Q9NPJ8 142 aaKnown RBP10.66□□□□□ -0.7
CLTA-201ENST00000242285 APOMO95445 188 aa10.65□□□□□ -0.7
CLTA-201ENST00000242285 OXTP01178 125 aa10.65□□□□□ -0.7
CLTA-201ENST00000242285 COX6A2Q02221 97 aa10.65□□□□□ -0.7
CLTA-201ENST00000242285 RHEBQ15382 184 aa10.65□□□□□ -0.7
CLTA-201ENST00000242285 CARD19Q96LW7 228 aa10.65□□□□□ -0.7
CLTA-201ENST00000242285 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
CLTA-201ENST00000242285 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms