RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 BRWD1-AS2P59051 145 aa12.74□□□□□ -0.37
ITGB4-201ENST00000200181 Q6JHZ5 121 aa12.74□□□□□ -0.37
ITGB4-201ENST00000200181 SMIM26A0A096LP01 95 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 FRMPD3Q5JV73 1810 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 TSHBP01222 138 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 CLUHP3Q96NS8 147 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
ITGB4-201ENST00000200181 PLCE1Q9P212 2302 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 LMO4P61968 165 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
ITGB4-201ENST00000200181 ZGRF1Q86YA3 2104 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
ITGB4-201ENST00000200181 C2orf91Q6ZV80 131 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGB4-201ENST00000200181 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 IGLV9-49A0A0B4J1Y8 123 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 SOSTDC1Q6X4U4 206 aa12.72□□□□□ -0.37
ITGB4-201ENST00000200181 ZNF295-AS1Q8N0V1 137 aa12.71□□□□□ -0.37
ITGB4-201ENST00000200181 UBE2D3P61077 147 aa12.71□□□□□ -0.37
ITGB4-201ENST00000200181 PMAIP1Q13794 54 aa12.71□□□□□ -0.37
ITGB4-201ENST00000200181 RPL37AP8A6NKH3 93 aa12.71□□□□□ -0.38
ITGB4-201ENST00000200181 PCNX2A6NKB5 2137 aa12.7□□□□□ -0.38
ITGB4-201ENST00000200181 SHANK1Q9Y566 2161 aa12.7□□□□□ -0.38
ITGB4-201ENST00000200181 CREBBPQ92793 2442 aa12.7□□□□□ -0.38
ITGB4-201ENST00000200181 Q6Q795 121 aa12.7□□□□□ -0.38
ITGB4-201ENST00000200181 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
ITGB4-201ENST00000200181 C1orf229Q6ZS94 237 aaPredicted RBP12.7□□□□□ -0.38
ITGB4-201ENST00000200181 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
ITGB4-201ENST00000200181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.69□□□□□ -0.38
ITGB4-201ENST00000200181 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 LOC107984640A0A0U1RRK4 108 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 LINC00959A0A1B0GUT2 108 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 EBI3Q14213 229 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 TRAV10A0A0B4J240 114 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 NRACQ8N912 160 aa12.69□□□□□ -0.38
ITGB4-201ENST00000200181 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
ITGB4-201ENST00000200181 COX17Q14061 63 aa12.68□□□□□ -0.38
ITGB4-201ENST00000200181 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
ITGB4-201ENST00000200181 Q6ZVQ6 151 aa12.67□□□□□ -0.38
ITGB4-201ENST00000200181 Q6ZS46 218 aa12.67□□□□□ -0.38
ITGB4-201ENST00000200181 EIF4EBP1Q13541 118 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-201ENST00000200181 YPEL4Q96NS1 127 aa12.66□□□□□ -0.38
ITGB4-201ENST00000200181 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
ITGB4-201ENST00000200181 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
ITGB4-201ENST00000200181 Q6ZPA2 131 aa12.66□□□□□ -0.38
ITGB4-201ENST00000200181 TRAV7A0A075B6U4 112 aa12.65□□□□□ -0.38
ITGB4-201ENST00000200181 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.38
ITGB4-201ENST00000200181 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
ITGB4-201ENST00000200181 IGLV2-11P01706 119 aa12.65□□□□□ -0.38
ITGB4-201ENST00000200181 LELP1Q5T871 98 aa12.65□□□□□ -0.38
ITGB4-201ENST00000200181 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
ITGB4-201ENST00000200181 ARHGAP21Q5T5U3 1957 aa12.64□□□□□ -0.39
ITGB4-201ENST00000200181 UBE2D2P62837 147 aa12.64□□□□□ -0.39
ITGB4-201ENST00000200181 WISP2O76076 250 aa12.64□□□□□ -0.39
ITGB4-201ENST00000200181 C10orf25Q5T742 122 aa12.63□□□□□ -0.39
ITGB4-201ENST00000200181 TNCP24821 2201 aa12.63□□□□□ -0.39
ITGB4-201ENST00000200181 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
ITGB4-201ENST00000200181 NTM-AS1Q6ZSK4 140 aa12.62□□□□□ -0.39
ITGB4-201ENST00000200181 ESRGQ1W209 222 aa12.62□□□□□ -0.39
ITGB4-201ENST00000200181 Q8NA96 180 aa12.62□□□□□ -0.39
ITGB4-201ENST00000200181 RETNQ9HD89 108 aa12.62□□□□□ -0.39
ITGB4-201ENST00000200181 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
ITGB4-201ENST00000200181 Q6ZSV7 163 aa12.61□□□□□ -0.39
ITGB4-201ENST00000200181 LINC00208Q96KT6 92 aa12.61□□□□□ -0.39
ITGB4-201ENST00000200181 M0R2N4 97 aa12.61□□□□□ -0.39
ITGB4-201ENST00000200181 Q8IZM0 81 aa12.61□□□□□ -0.39
ITGB4-201ENST00000200181 C10orf99Q6UWK7 81 aa12.6□□□□□ -0.39
ITGB4-201ENST00000200181 ANAPC1Q9H1A4 1944 aa12.6□□□□□ -0.39
ITGB4-201ENST00000200181 PRR9Q5T870 116 aa12.6□□□□□ -0.39
ITGB4-201ENST00000200181 MUC7Q8TAX7 377 aa12.6□□□□□ -0.39
ITGB4-201ENST00000200181 A0A087WVE0 104 aa12.59□□□□□ -0.39
ITGB4-201ENST00000200181 C19orf84I3L1E1 186 aa12.59□□□□□ -0.39
ITGB4-201ENST00000200181 MGAMO43451 1857 aa12.59□□□□□ -0.39
ITGB4-201ENST00000200181 TRBV7-6A0A0J9YX20 115 aa12.59□□□□□ -0.39
ITGB4-201ENST00000200181 POLR2KP53803 58 aaKnown RBP12.59□□□□□ -0.39
ITGB4-201ENST00000200181 INAFM1C9JVW0 142 aa12.58□□□□□ -0.39
ITGB4-201ENST00000200181 PCNX1Q96RV3 2341 aa12.58□□□□□ -0.4
ITGB4-201ENST00000200181 PRYO14603 147 aa12.58□□□□□ -0.4
ITGB4-201ENST00000200181 LINC00474Q9P2X8 69 aa12.58□□□□□ -0.4
ITGB4-201ENST00000200181 SHISA2Q6UWI4 295 aa12.58□□□□□ -0.4
ITGB4-201ENST00000200181 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
ITGB4-201ENST00000200181 PSPHP1O15172 72 aa12.57□□□□□ -0.4
ITGB4-201ENST00000200181 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
ITGB4-201ENST00000200181 FSTL3O95633 263 aa12.57□□□□□ -0.4
ITGB4-201ENST00000200181 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
ITGB4-201ENST00000200181 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
ITGB4-201ENST00000200181 KLLNB2CW77 178 aa12.56□□□□□ -0.4
ITGB4-201ENST00000200181 TANC1Q9C0D5 1861 aa12.56□□□□□ -0.4
ITGB4-201ENST00000200181 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
ITGB4-201ENST00000200181 DENND4CQ5VZ89 1909 aa12.55□□□□□ -0.4
ITGB4-201ENST00000200181 GPR179Q6PRD1 2367 aa12.55□□□□□ -0.4
ITGB4-201ENST00000200181 CDC42SE2Q9NRR3 84 aa12.55□□□□□ -0.4
ITGB4-201ENST00000200181 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
ITGB4-201ENST00000200181 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
ITGB4-201ENST00000200181 Q8N814 137 aa12.54□□□□□ -0.4
ITGB4-201ENST00000200181 CRIP3Q6Q6R5 217 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms