RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	USP17L21	D6R901	530 aa		19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	POLR3G	O15318	223 aa	Predicted RBP	19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	CIAO1	O76071	339 aa		19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	KIAA0754	O94854	1291 aa		19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	PTPN12	Q05209	780 aa	Known RBP	19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	USP28	Q96RU2	1077 aa		19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	NAA15	Q9BXJ9	866 aa	Known RBP	19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	GTPBP4	Q9BZE4	634 aa	Known RBP	19.89	■□□□□ 0.77
SCARB2-223	ENST00000640640	IL6ST	P40189	918 aa	Predicted RBP	19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	PHKA1	P46020	1223 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	ANTXR1	Q9H6X2	564 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	RRAGD	Q9NQL2	400 aa	Predicted RBP	19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	SLU7	O95391	586 aa	Known RBP	19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	UBXN1	Q04323	297 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	PPARA	Q07869	468 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	TTC38	Q5R3I4	469 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	CERS3	Q8IU89	383 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	ZNF654	Q8IZM8	581 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	hCG_1642624	A0A1W2PR95	340 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	DCAF8L1	A6NGE4	600 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	SASH1	O94885	1247 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	BMS1	Q14692	1282 aa	Known RBP	19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	ZNF589	Q86UQ0	364 aa	Predicted RBP	19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	USP21	Q9UK80	565 aa		19.88	■□□□□ 0.77
SCARB2-223	ENST00000640640	DES	P17661	470 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	SEPT7	Q16181	437 aa	Known RBP	19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	ZMYM1	Q5SVZ6	1142 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	GPCPD1	Q9NPB8	672 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	WWC3	Q9ULE0	1092 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	PLCD1	P51178	756 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	EIF6	P56537	245 aa	Known RBP	19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	CHMP4BP1	P59074	171 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	SETBP1	Q9Y6X0	1596 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	TFAP4	Q01664	338 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	CUL4A	Q13619	759 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	HLTF	Q14527	1009 aa	Known RBP eCLIP	19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	UBE3C	Q15386	1083 aa		19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	RNF216	Q9NWF9	866 aa	Predicted RBP	19.87	■□□□□ 0.77
SCARB2-223	ENST00000640640	HEG1	Q9ULI3	1381 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	ADAL	Q6DHV7	355 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	MAPKAPK5	Q8IW41	473 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	CCDC42	Q96M95	316 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	PRDM10	Q9NQV6	1147 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	LUC7L2	Q9Y383	392 aa	Known RBP	19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640		V9GYY5	206 aa	Predicted RBP	19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	ADCY9	O60503	1353 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	GPT2	Q8TD30	523 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	SRRT	Q9BXP5	876 aa	Known RBP	19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	VPS54	Q9P1Q0	977 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	LMTK2	Q8IWU2	1503 aa		19.86	■□□□□ 0.77
SCARB2-223	ENST00000640640	SPDYE4	A6NLX3	237 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	ZNF75D	P51815	510 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	SDR42E1	Q8WUS8	393 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CTAGE15	A4D2H0	777 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CYP27B1	O15528	508 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CTAGE8	P0CG41	777 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	PRPF4B	Q13523	1007 aa	Known RBP	19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CTAGE6	Q86UF2	777 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CTAGE4	Q8IX94	777 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	MLKL	Q8NB16	471 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	PI4K2B	Q8TCG2	481 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	SETD1B	Q9UPS6	1966 aa	Known RBP	19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CHRND	Q07001	517 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CCDC174	Q6PII3	467 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	LZTFL1	Q9NQ48	299 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	AXIN2	Q9Y2T1	843 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CRKL	P46109	303 aa	Known RBP	19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	FANCC	Q00597	558 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	SYT10	Q6XYQ8	523 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	CNGA4	Q8IV77	575 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	MED14	O60244	1454 aa		19.85	■□□□□ 0.77
SCARB2-223	ENST00000640640	PDIA3	P30101	505 aa	Known RBP	19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	KRT83	P78385	493 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	KIF5A	Q12840	1032 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	KARS	Q15046	597 aa	Known RBP	19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	FAM47A	Q5JRC9	791 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	QRICH2	Q9H0J4	1663 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	MACROD2	A1Z1Q3	448 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	KRT86	O43790	486 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	TGFBRAP1	Q8WUH2	860 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	JDP2	Q8WYK2	163 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	DRC1	Q96MC2	740 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	CEP152	O94986	1710 aa		19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	CCT6A	P40227	531 aa	Known RBP	19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	BAG1	Q99933	345 aa	Predicted RBP	19.84	■□□□□ 0.77
SCARB2-223	ENST00000640640	NR1I2	O75469	434 aa		19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	CCDC172	P0C7W6	258 aa		19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	DPP8	Q6V1X1	898 aa	Predicted RBP	19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	SV2B	Q7L1I2	683 aa		19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	GAS2L3	Q86XJ1	694 aa		19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	ATG3	Q9NT62	314 aa		19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	ARFGAP3	Q9NP61	516 aa		19.83	■□□□□ 0.77
SCARB2-223	ENST00000640640	NLRP12	P59046	1061 aa		19.83	■□□□□ 0.76
SCARB2-223	ENST00000640640	SCRN1	Q12765	414 aa		19.83	■□□□□ 0.76
SCARB2-223	ENST00000640640	MAPK8IP1	Q9UQF2	711 aa		19.83	■□□□□ 0.76
SCARB2-223	ENST00000640640	NFE2L3	Q9Y4A8	694 aa		19.83	■□□□□ 0.76
SCARB2-223	ENST00000640640	IFI16	Q16666	785 aa	Known RBP	19.83	■□□□□ 0.76
SCARB2-223	ENST00000640640	TBC1D22A	Q8WUA7	517 aa		19.83	■□□□□ 0.76
SCARB2-223	ENST00000640640	ARPP21	Q9UBL0	812 aa	Predicted RBP	19.83	■□□□□ 0.76

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