RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 C17orf99Q6UX52 265 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 PI16Q6UXB8 463 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 ERICH6Q7L0X2 663 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 ZSCAN29Q8IWY8 852 aaPredicted RBP20.83■□□□□ 0.93
SMN2-216ENST00000638794 ZNF384Q8TF68 577 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
SMN2-216ENST00000638794 HMG20BQ9P0W2 317 aa20.83■□□□□ 0.93
SMN2-216ENST00000638794 DOCK1Q14185 1865 aa20.82■□□□□ 0.92
SMN2-216ENST00000638794 DDTLA6NHG4 134 aaPredicted RBP20.82■□□□□ 0.92
SMN2-216ENST00000638794 PICALMQ13492 652 aa20.82■□□□□ 0.92
SMN2-216ENST00000638794 TMEM57Q8N5G2 664 aa20.82■□□□□ 0.92
SMN2-216ENST00000638794 CPA4Q9UI42 421 aa20.82■□□□□ 0.92
SMN2-216ENST00000638794 PTPRFP10586 1907 aa20.82■□□□□ 0.92
SMN2-216ENST00000638794 ADGRA2Q96PE1 1338 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 SLURP2P0DP57 97 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 EN2P19622 333 aaPredicted RBP20.81■□□□□ 0.92
SMN2-216ENST00000638794 G3BP1Q13283 466 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMN2-216ENST00000638794 GORABQ5T7V8 394 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 NBPF11Q86T75 865 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 SCYL3Q8IZE3 742 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 SPATA5Q8NB90 893 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 PHIPQ8WWQ0 1821 aa20.81■□□□□ 0.92
SMN2-216ENST00000638794 GPR75-ASB3A0A0A6YYF3 556 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 CXCL11O14625 94 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 ECM2O94769 699 aaPredicted RBP20.8■□□□□ 0.92
SMN2-216ENST00000638794 ARID4AP29374 1257 aaPredicted RBP20.8■□□□□ 0.92
SMN2-216ENST00000638794 RHBDL3P58872 404 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 MAP3K10Q02779 954 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 ZKSCAN2Q63HK3 967 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 TBC1D9Q6ZT07 1266 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 ZHX2Q9Y6X8 837 aa20.8■□□□□ 0.92
SMN2-216ENST00000638794 GNRH1P01148 92 aa20.79■□□□□ 0.92
SMN2-216ENST00000638794 CTGFP29279 349 aa20.79■□□□□ 0.92
SMN2-216ENST00000638794 GPAT2Q6NUI2 795 aa20.79■□□□□ 0.92
SMN2-216ENST00000638794 NSUN4Q96CB9 384 aaKnown RBP20.79■□□□□ 0.92
SMN2-216ENST00000638794 TMEM106CQ9BVX2 250 aa20.79■□□□□ 0.92
SMN2-216ENST00000638794 PICK1Q9NRD5 415 aa20.79■□□□□ 0.92
SMN2-216ENST00000638794 PTPRAP18433 802 aa20.78■□□□□ 0.92
SMN2-216ENST00000638794 MCAMP43121 646 aa20.78■□□□□ 0.92
SMN2-216ENST00000638794 SH3TC2Q8TF17 1288 aa20.78■□□□□ 0.92
SMN2-216ENST00000638794 PARK7Q99497 189 aaKnown RBP20.78■□□□□ 0.92
SMN2-216ENST00000638794 A0A0G2JLL6 359 aaPredicted RBP20.77■□□□□ 0.92
SMN2-216ENST00000638794 MYCP01106 439 aaPredicted RBP20.77■□□□□ 0.92
SMN2-216ENST00000638794 PSMC4P43686 418 aa20.77■□□□□ 0.92
SMN2-216ENST00000638794 PRRT2Q7Z6L0 340 aaPredicted RBP20.77■□□□□ 0.92
SMN2-216ENST00000638794 TRIM47Q96LD4 638 aa20.77■□□□□ 0.92
SMN2-216ENST00000638794 RAI14Q9P0K7 980 aa20.77■□□□□ 0.92
SMN2-216ENST00000638794 AFG3L2Q9Y4W6 797 aa20.77■□□□□ 0.92
SMN2-216ENST00000638794 MGAMO43451 1857 aa20.77■□□□□ 0.92
SMN2-216ENST00000638794 MAST2Q6P0Q8 1798 aa20.77■□□□□ 0.91
SMN2-216ENST00000638794 CTNND1O60716 968 aaKnown RBP20.76■□□□□ 0.91
SMN2-216ENST00000638794 NPM3O75607 178 aaKnown RBP20.76■□□□□ 0.91
SMN2-216ENST00000638794 LDHCP07864 332 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 UQCRFS1P1P0C7P4 283 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 CYP2C8P10632 490 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 PRMT2P55345 433 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 GSTO1P78417 241 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
SMN2-216ENST00000638794 POLA2Q14181 598 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.76■□□□□ 0.91
SMN2-216ENST00000638794 ATAD5Q96QE3 1844 aa20.76■□□□□ 0.91
SMN2-216ENST00000638794 FASTKD5Q7L8L6 764 aaKnown RBP20.75■□□□□ 0.91
SMN2-216ENST00000638794 SSH3Q8TE77 659 aa20.75■□□□□ 0.91
SMN2-216ENST00000638794 C1orf115Q9H7X2 142 aa20.75■□□□□ 0.91
SMN2-216ENST00000638794 SRRDQ9UH36 339 aa20.75■□□□□ 0.91
SMN2-216ENST00000638794 MYO5AQ9Y4I1 1855 aaKnown RBP20.75■□□□□ 0.91
SMN2-216ENST00000638794 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
SMN2-216ENST00000638794 FAM196BA6NMK8 535 aa20.74■□□□□ 0.91
SMN2-216ENST00000638794 FMNL1O95466 1100 aaPredicted RBP20.74■□□□□ 0.91
SMN2-216ENST00000638794 MAP4K4O95819 1239 aaPredicted RBP20.74■□□□□ 0.91
SMN2-216ENST00000638794 BCRP11274 1271 aa20.74■□□□□ 0.91
SMN2-216ENST00000638794 OSBPP22059 807 aa20.74■□□□□ 0.91
SMN2-216ENST00000638794 GADL1Q6ZQY3 521 aa20.74■□□□□ 0.91
SMN2-216ENST00000638794 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
SMN2-216ENST00000638794 GPR108Q9NPR9 543 aa20.74■□□□□ 0.91
SMN2-216ENST00000638794 LRP2BPQ9P2M1 347 aa20.74■□□□□ 0.91
SMN2-216ENST00000638794 CDK5RAP2Q96SN8 1893 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 TRIM75PA6NK02 468 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 TBC1D12O60347 775 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 ATP8B2P98198 1209 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
SMN2-216ENST00000638794 TNNI3KQ59H18 835 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 FTSJ3Q8IY81 847 aaKnown RBP20.73■□□□□ 0.91
SMN2-216ENST00000638794 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
SMN2-216ENST00000638794 SNRKQ9NRH2 765 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 FPGT-TNNI3KV9GXZ4 949 aa20.73■□□□□ 0.91
SMN2-216ENST00000638794 RLBP1P12271 317 aa20.72■□□□□ 0.91
SMN2-216ENST00000638794 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
SMN2-216ENST00000638794 TEX11Q8IYF3 940 aa20.72■□□□□ 0.91
SMN2-216ENST00000638794 MIER1Q8N108 512 aa20.72■□□□□ 0.91
SMN2-216ENST00000638794 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.72■□□□□ 0.91
SMN2-216ENST00000638794 MYPNQ86TC9 1320 aa20.72■□□□□ 0.91
SMN2-216ENST00000638794 SIPA1L1O43166 1804 aa20.71■□□□□ 0.91
SMN2-216ENST00000638794 SURF6O75683 361 aaKnown RBP20.71■□□□□ 0.91
SMN2-216ENST00000638794 HOXD10P28358 340 aa20.71■□□□□ 0.91
SMN2-216ENST00000638794 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
SMN2-216ENST00000638794 RAET1EQ8TD07 263 aa20.71■□□□□ 0.91
SMN2-216ENST00000638794 SH3RF3Q8TEJ3 882 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms