RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 ZBTB43O43298 467 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 ONECUT3O60422 494 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-225ENST00000638099 MAPK8IP2Q13387 824 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-225ENST00000638099 FAM47AQ5JRC9 791 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 TICAM2Q86XR7 235 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 ANP32BQ92688 251 aaKnown RBP9.22□□□□□ -0.93
GABRB3-225ENST00000638099 NSUN4Q96CB9 384 aaKnown RBP9.22□□□□□ -0.93
GABRB3-225ENST00000638099 SLC26A6Q9BXS9 759 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 SCAND2PQ9GZW5 306 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-225ENST00000638099 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-225ENST00000638099 USP25Q9UHP3 1055 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 CACNA1SQ13698 1873 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 CCDC69A6NI79 296 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 EVCP57679 992 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 GPSM2P81274 684 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 GOLPH3LQ9H4A5 285 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 SLC12A7Q9Y666 1083 aa9.22□□□□□ -0.93
GABRB3-225ENST00000638099 ME1P48163 572 aa9.21□□□□□ -0.93
GABRB3-225ENST00000638099 TXNRD1Q16881 649 aa9.21□□□□□ -0.93
GABRB3-225ENST00000638099 ZNF827Q17R98 1081 aa9.21□□□□□ -0.93
GABRB3-225ENST00000638099 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.93
GABRB3-225ENST00000638099 ALG1Q9BT22 464 aa9.21□□□□□ -0.93
GABRB3-225ENST00000638099 PNPLA7Q6ZV29 1317 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 UFL1O94874 794 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 USP17L8P0C7I0 530 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 GRAPQ13588 217 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 ALX1Q15699 326 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 FBXO18Q8NFZ0 1043 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 GRAPLQ8TC17 118 aaPredicted RBP9.21□□□□□ -0.94
GABRB3-225ENST00000638099 NUP62CLQ9H1M0 184 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
GABRB3-225ENST00000638099 KCNJ14Q9UNX9 436 aa9.21□□□□□ -0.94
GABRB3-225ENST00000638099 ZMYM6O95789 1325 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 MARCKSP29966 332 aaPredicted RBP9.2□□□□□ -0.94
GABRB3-225ENST00000638099 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 WTAPQ15007 396 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 CTR9Q6PD62 1173 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 DZIP1Q86YF9 867 aaKnown RBP9.2□□□□□ -0.94
GABRB3-225ENST00000638099 CCAR1Q8IX12 1150 aaKnown RBP9.2□□□□□ -0.94
GABRB3-225ENST00000638099 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 TNMDQ9H2S6 317 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
GABRB3-225ENST00000638099 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 COL24A1Q17RW2 1714 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 A0A1B0GVL5 298 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 NTRK3Q16288 839 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 STAG1Q8WVM7 1258 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 TNKSO95271 1327 aa9.2□□□□□ -0.94
GABRB3-225ENST00000638099 AP5Z1O43299 807 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 DHX16O60231 1041 aaKnown RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 APBA3O96018 575 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 GNAT2P19087 354 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 ATP2B1P20020 1258 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 IARSP41252 1262 aaKnown RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 KRT40Q6A162 431 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 TMEM87BQ96K49 555 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 ZNF830Q96NB3 372 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 UBAC1Q9BSL1 405 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 SAP30BPQ9UHR5 308 aaKnown RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 CFAP45Q9UL16 551 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 KIF3AQ9Y496 699 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 ELP1O95163 1332 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 SRCAPQ6ZRS2 3230 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 F8W031 263 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 LUZP1Q86V48 1076 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 FAM43AQ8N2R8 423 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 FBXL16Q8N461 479 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 SLC44A5Q8NCS7 719 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-225ENST00000638099 FUCA2Q9BTY2 467 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 KRT23Q9C075 422 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 MCM9Q9NXL9 1143 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 PCDHA7Q9UN72 937 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 UBR3Q6ZT12 1888 aa9.19□□□□□ -0.94
GABRB3-225ENST00000638099 ERICH2A1L162 156 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 ESPNB1AK53 854 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 KIF23Q02241 960 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 STK38Q15208 465 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 ENAHQ8N8S7 591 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 FSIP1Q8NA03 581 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 PPP1R9BQ96SB3 815 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 MXD3Q9BW11 206 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 DCP1AQ9NPI6 582 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 POLLQ9UGP5 575 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 MYH15Q9Y2K3 1946 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 ST5P78524 1137 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 SF3A1Q15459 793 aaKnown RBP9.18□□□□□ -0.94
GABRB3-225ENST00000638099 RTN1Q16799 776 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 SYNE3Q6ZMZ3 975 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 ZNF654Q8IZM8 581 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 CNNM2Q9H8M5 875 aa9.18□□□□□ -0.94
GABRB3-225ENST00000638099 IRS2Q9Y4H2 1338 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms