RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 USP17L21D6R901 530 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 ME1P48163 572 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 FAM43AQ8N2R8 423 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 RPGRQ92834 1020 aaKnown RBP17.91■□□□□ 0.46
SCN8A-214ENST00000637709 ALG1Q9BT22 464 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 NUP62CLQ9H1M0 184 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 ELP1O95163 1332 aa17.91■□□□□ 0.46
SCN8A-214ENST00000637709 DDR1Q08345 913 aa17.9■□□□□ 0.46
SCN8A-214ENST00000637709 FBXO18Q8NFZ0 1043 aa17.9■□□□□ 0.46
SCN8A-214ENST00000637709 TNMDQ9H2S6 317 aa17.9■□□□□ 0.46
SCN8A-214ENST00000637709 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
SCN8A-214ENST00000637709 GRAPQ13588 217 aa17.9■□□□□ 0.46
SCN8A-214ENST00000637709 GRAPLQ8TC17 118 aaPredicted RBP17.9■□□□□ 0.46
SCN8A-214ENST00000637709 KIF3AQ9Y496 699 aa17.9■□□□□ 0.46
SCN8A-214ENST00000637709 GNAT2P19087 354 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 GPSM2P81274 684 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 WTAPQ15007 396 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 FAM47AQ5JRC9 791 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 STAG1Q8WVM7 1258 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 PPP1R9BQ96SB3 815 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 ANKRD2Q9GZV1 360 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 CFAP45Q9UL16 551 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 NTRK3Q16288 839 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.45
SCN8A-214ENST00000637709 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 FUCA2Q9BTY2 467 aa17.89■□□□□ 0.45
SCN8A-214ENST00000637709 CTR9Q6PD62 1173 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 DZIP1Q86YF9 867 aaKnown RBP17.88■□□□□ 0.45
SCN8A-214ENST00000637709 PIBF1Q8WXW3 757 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 ESPNB1AK53 854 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 MSL1Q68DK7 614 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 KRT23Q9C075 422 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 KCNJ14Q9UNX9 436 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 TNKSO95271 1327 aa17.88■□□□□ 0.45
SCN8A-214ENST00000637709 A0A1B0GVL5 298 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 UFL1O94874 794 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 MARCKSP29966 332 aaPredicted RBP17.87■□□□□ 0.45
SCN8A-214ENST00000637709 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
SCN8A-214ENST00000637709 ZNF827Q17R98 1081 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 UBAC1Q9BSL1 405 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 AP5Z1O43299 807 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 USP17L8P0C7I0 530 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 KRT40Q6A162 431 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 CNNM2Q9H8M5 875 aa17.87■□□□□ 0.45
SCN8A-214ENST00000637709 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
SCN8A-214ENST00000637709 KIF23Q02241 960 aaPredicted RBP17.86■□□□□ 0.45
SCN8A-214ENST00000637709 PCDHA7Q9UN72 937 aa17.86■□□□□ 0.45
SCN8A-214ENST00000637709 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
SCN8A-214ENST00000637709 IRS2Q9Y4H2 1338 aa17.86■□□□□ 0.45
SCN8A-214ENST00000637709 PDIA4P13667 645 aaKnown RBP17.86■□□□□ 0.45
SCN8A-214ENST00000637709 GNL2Q13823 731 aaKnown RBP17.86■□□□□ 0.45
SCN8A-214ENST00000637709 LUZP1Q86V48 1076 aa17.86■□□□□ 0.45
SCN8A-214ENST00000637709 SGMS1Q86VZ5 419 aa17.86■□□□□ 0.45
SCN8A-214ENST00000637709 DCP1AQ9NPI6 582 aaPredicted RBP17.86■□□□□ 0.45
SCN8A-214ENST00000637709 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
SCN8A-214ENST00000637709 ERICH2A1L162 156 aa17.85■□□□□ 0.45
SCN8A-214ENST00000637709 RIMBP2O15034 1052 aa17.85■□□□□ 0.45
SCN8A-214ENST00000637709 ENAHQ8N8S7 591 aaPredicted RBP17.85■□□□□ 0.45
SCN8A-214ENST00000637709 RCOR1Q9UKL0 485 aa17.85■□□□□ 0.45
SCN8A-214ENST00000637709 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
SCN8A-214ENST00000637709 ST5P78524 1137 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 TYRO3Q06418 890 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 STK38Q15208 465 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 MYSM1Q5VVJ2 828 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 ZNF654Q8IZM8 581 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 DYNLL2Q96FJ2 89 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 ZNF830Q96NB3 372 aaPredicted RBP17.84■□□□□ 0.45
SCN8A-214ENST00000637709 MRVI1Q9Y6F6 885 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 LIFRP42702 1097 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 SF3A1Q15459 793 aaKnown RBP17.84■□□□□ 0.45
SCN8A-214ENST00000637709 RTN1Q16799 776 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
SCN8A-214ENST00000637709 PDLIM2Q96JY6 352 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
SCN8A-214ENST00000637709 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
SCN8A-214ENST00000637709 ATP2B1P20020 1258 aa17.83■□□□□ 0.45
SCN8A-214ENST00000637709 SART3Q15020 963 aaKnown RBP17.83■□□□□ 0.45
SCN8A-214ENST00000637709 SAP30BPQ9UHR5 308 aaKnown RBP17.83■□□□□ 0.45
SCN8A-214ENST00000637709 XDHP47989 1333 aa17.83■□□□□ 0.44
SCN8A-214ENST00000637709 SSRP1Q08945 709 aaKnown RBP17.83■□□□□ 0.44
SCN8A-214ENST00000637709 SNW1Q13573 536 aaKnown RBP17.83■□□□□ 0.44
SCN8A-214ENST00000637709 ESR2Q92731 530 aa17.83■□□□□ 0.44
SCN8A-214ENST00000637709 DNAJC25Q9H1X3 360 aa17.83■□□□□ 0.44
SCN8A-214ENST00000637709 CLSTN2Q9H4D0 955 aa17.83■□□□□ 0.44
SCN8A-214ENST00000637709 POLLQ9UGP5 575 aa17.83■□□□□ 0.44
SCN8A-214ENST00000637709 MYH6P13533 1939 aa17.83■□□□□ 0.44
SCN8A-214ENST00000637709 C6orf229H3BNL8 230 aa17.82■□□□□ 0.44
SCN8A-214ENST00000637709 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
SCN8A-214ENST00000637709 LDHBP07195 334 aaKnown RBP17.82■□□□□ 0.44
SCN8A-214ENST00000637709 CCDC192P0DO97 292 aa17.82■□□□□ 0.44
SCN8A-214ENST00000637709 SLC44A5Q8NCS7 719 aa17.82■□□□□ 0.44
SCN8A-214ENST00000637709 DUOX1Q9NRD9 1551 aa17.82■□□□□ 0.44
SCN8A-214ENST00000637709 BTBD18B2RXH4 712 aa17.82■□□□□ 0.44
SCN8A-214ENST00000637709 F8W031 263 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms