RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 MAGEB6P1A0A0J9YX57 407 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 AOC2O75106 756 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 CELF2O95319 508 aaKnown RBP20.76■□□□□ 0.91
CLN6-218ENST00000637223 GSPT1P15170 499 aaKnown RBP20.76■□□□□ 0.91
CLN6-218ENST00000637223 RGS3P49796 1198 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 FKBP1CQ5VVH2 108 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 CST9Q5W186 159 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 DDX4Q9NQI0 724 aaKnown RBP20.76■□□□□ 0.91
CLN6-218ENST00000637223 FAM198AQ9UFP1 575 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 PPP2R3BQ9Y5P8 575 aa20.76■□□□□ 0.91
CLN6-218ENST00000637223 RFX7Q2KHR2 1363 aa20.75■□□□□ 0.91
CLN6-218ENST00000637223 ZFYP08048 801 aaPredicted RBP20.75■□□□□ 0.91
CLN6-218ENST00000637223 PLCG2P16885 1265 aa20.75■□□□□ 0.91
CLN6-218ENST00000637223 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
CLN6-218ENST00000637223 CDAN1Q8IWY9 1227 aa20.75■□□□□ 0.91
CLN6-218ENST00000637223 RIOK1Q9BRS2 568 aaKnown RBP20.75■□□□□ 0.91
CLN6-218ENST00000637223 IDI2Q9BXS1 227 aa20.75■□□□□ 0.91
CLN6-218ENST00000637223 THSD7BQ9C0I4 1608 aa20.75■□□□□ 0.91
CLN6-218ENST00000637223 MBD4O95243 580 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 MAP2K2P36507 400 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 NBPF12Q5TAG4 269 aaPredicted RBP20.74■□□□□ 0.91
CLN6-218ENST00000637223 FAM83AQ86UY5 434 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 ZFPM1Q8IX07 1006 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 LCORLQ8N3X6 602 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
CLN6-218ENST00000637223 ARMT1Q9H993 441 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 TLL2Q9Y6L7 1015 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 ECM29Q5VYK3 1845 aa20.74■□□□□ 0.91
CLN6-218ENST00000637223 MAPKAPK5Q8IW41 473 aa20.73■□□□□ 0.91
CLN6-218ENST00000637223 TGFBRAP1Q8WUH2 860 aa20.73■□□□□ 0.91
CLN6-218ENST00000637223 FAM151AQ8WW52 585 aa20.73■□□□□ 0.91
CLN6-218ENST00000637223 APPBP2Q92624 585 aa20.73■□□□□ 0.91
CLN6-218ENST00000637223 OSBP2Q969R2 916 aa20.73■□□□□ 0.91
CLN6-218ENST00000637223 TEPSINQ96N21 525 aa20.73■□□□□ 0.91
CLN6-218ENST00000637223 ENTPD3O75355 529 aa20.72■□□□□ 0.91
CLN6-218ENST00000637223 CERS3Q8IU89 383 aa20.72■□□□□ 0.91
CLN6-218ENST00000637223 M0R2C6 588 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 SDSP20132 328 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 NF2P35240 595 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 USP5P45974 858 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 DGKZQ13574 1117 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 PRKG1Q13976 671 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 ZMYM1Q5SVZ6 1142 aa20.71■□□□□ 0.91
CLN6-218ENST00000637223 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
CLN6-218ENST00000637223 CASP8AP2Q9UKL3 1982 aa20.7■□□□□ 0.9
CLN6-218ENST00000637223 CA12O43570 354 aa20.7■□□□□ 0.9
CLN6-218ENST00000637223 SUPT20HL1Q3ZLR7 823 aa20.7■□□□□ 0.9
CLN6-218ENST00000637223 ZSCAN29Q8IWY8 852 aaPredicted RBP20.7■□□□□ 0.9
CLN6-218ENST00000637223 CRNKL1Q9BZJ0 848 aaKnown RBP20.7■□□□□ 0.9
CLN6-218ENST00000637223 OSBPL5Q9H0X9 879 aaPredicted RBP20.7■□□□□ 0.9
CLN6-218ENST00000637223 GBA2Q9HCG7 927 aaPredicted RBP20.7■□□□□ 0.9
CLN6-218ENST00000637223 FZD1Q9UP38 647 aa20.7■□□□□ 0.9
CLN6-218ENST00000637223 SSC5DA1L4H1 1573 aa20.7■□□□□ 0.9
CLN6-218ENST00000637223 FLT1P17948 1338 aa20.7■□□□□ 0.9
CLN6-218ENST00000637223 PRKAB2O43741 272 aa20.69■□□□□ 0.9
CLN6-218ENST00000637223 NPM3O75607 178 aaKnown RBP20.69■□□□□ 0.9
CLN6-218ENST00000637223 TTLL12Q14166 644 aaPredicted RBP20.69■□□□□ 0.9
CLN6-218ENST00000637223 SH3BP5LQ7L8J4 393 aa20.69■□□□□ 0.9
CLN6-218ENST00000637223 SDR42E1Q8WUS8 393 aa20.69■□□□□ 0.9
CLN6-218ENST00000637223 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
CLN6-218ENST00000637223 POLR2AP24928 1970 aaKnown RBP20.68■□□□□ 0.9
CLN6-218ENST00000637223 DDTLA6NHG4 134 aaPredicted RBP20.68■□□□□ 0.9
CLN6-218ENST00000637223 GPAA1O43292 621 aa20.68■□□□□ 0.9
CLN6-218ENST00000637223 NMIQ13287 307 aaPredicted RBP20.68■□□□□ 0.9
CLN6-218ENST00000637223 MOB2Q70IA6 237 aa20.68■□□□□ 0.9
CLN6-218ENST00000637223 C2orf69Q8N8R5 385 aa20.68■□□□□ 0.9
CLN6-218ENST00000637223 FAM227BQ96M60 508 aa20.68■□□□□ 0.9
CLN6-218ENST00000637223 SAP30BPQ9UHR5 308 aaKnown RBP20.68■□□□□ 0.9
CLN6-218ENST00000637223 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
CLN6-218ENST00000637223 A0A0D9SFI3 127 aa20.67■□□□□ 0.9
CLN6-218ENST00000637223 SLC4A8Q2Y0W8 1093 aa20.67■□□□□ 0.9
CLN6-218ENST00000637223 CCDC129Q6ZRS4 1044 aa20.67■□□□□ 0.9
CLN6-218ENST00000637223 SAPCD2Q86UD0 394 aa20.67■□□□□ 0.9
CLN6-218ENST00000637223 CSRNP1Q96S65 589 aa20.67■□□□□ 0.9
CLN6-218ENST00000637223 STRBPQ96SI9 672 aaKnown RBP20.67■□□□□ 0.9
CLN6-218ENST00000637223 SLC4A4Q9Y6R1 1079 aa20.67■□□□□ 0.9
CLN6-218ENST00000637223 MIGA2Q7L4E1 593 aa20.66■□□□□ 0.9
CLN6-218ENST00000637223 DIAPH3Q9NSV4 1193 aa20.66■□□□□ 0.9
CLN6-218ENST00000637223 ATRNL1Q5VV63 1379 aa20.65■□□□□ 0.9
CLN6-218ENST00000637223 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
CLN6-218ENST00000637223 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
CLN6-218ENST00000637223 HELLSQ9NRZ9 838 aa20.65■□□□□ 0.9
CLN6-218ENST00000637223 PALD1Q9ULE6 856 aa20.65■□□□□ 0.9
CLN6-218ENST00000637223 ANGEL1Q9UNK9 670 aaKnown RBP20.65■□□□□ 0.9
CLN6-218ENST00000637223 MYH7P12883 1935 aa20.65■□□□□ 0.9
CLN6-218ENST00000637223 UBE2Q2LH0YL09 131 aa20.64■□□□□ 0.89
CLN6-218ENST00000637223 PPP1R12BO60237 982 aaPredicted RBP20.64■□□□□ 0.89
CLN6-218ENST00000637223 HUNKP57058 714 aa20.64■□□□□ 0.89
CLN6-218ENST00000637223 FKBP1BP68106 108 aa20.64■□□□□ 0.89
CLN6-218ENST00000637223 ARMC9Q7Z3E5 817 aa20.64■□□□□ 0.89
CLN6-218ENST00000637223 HOOK2Q96ED9 719 aa20.64■□□□□ 0.89
CLN6-218ENST00000637223 DCP1AQ9NPI6 582 aaPredicted RBP20.64■□□□□ 0.89
CLN6-218ENST00000637223 COL2A1P02458 1487 aaPredicted RBP20.63■□□□□ 0.89
CLN6-218ENST00000637223 PDE4DIPQ5VU43 2346 aa20.63■□□□□ 0.89
CLN6-218ENST00000637223 HIP1O00291 1037 aa20.63■□□□□ 0.89
CLN6-218ENST00000637223 USP2O75604 605 aaPredicted RBP20.63■□□□□ 0.89
CLN6-218ENST00000637223 MCMDC2Q4G0Z9 681 aa20.63■□□□□ 0.89
CLN6-218ENST00000637223 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
CLN6-218ENST00000637223 DCAF15Q66K64 600 aa20.63■□□□□ 0.89
CLN6-218ENST00000637223 CWC27Q6UX04 472 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms