RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MTX1Q13505 466 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 MOGSQ13724 837 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 RASGRF1Q13972 1273 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
CTSD-208ENST00000636843 DZIP1Q86YF9 867 aaKnown RBP15.53■□□□□ 0.08
CTSD-208ENST00000636843 CPA4Q9UI42 421 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 MKI67P46013 3256 aaKnown RBP15.53■□□□□ 0.08
CTSD-208ENST00000636843 ADGRA2Q96PE1 1338 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 SRGAP3O43295 1099 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 PSMC4P43686 418 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 MAP3K10Q02779 954 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 PARK7Q99497 189 aaKnown RBP15.53■□□□□ 0.08
CTSD-208ENST00000636843 PICK1Q9NRD5 415 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 ABCF2Q9UG63 623 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 SRRDQ9UH36 339 aa15.53■□□□□ 0.08
CTSD-208ENST00000636843 AK9Q5TCS8 1911 aa15.52■□□□□ 0.08
CTSD-208ENST00000636843 ATRNL1Q5VV63 1379 aa15.52■□□□□ 0.08
CTSD-208ENST00000636843 A0A1B0GUL7 405 aa15.52■□□□□ 0.07
CTSD-208ENST00000636843 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
CTSD-208ENST00000636843 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.07
CTSD-208ENST00000636843 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.07
CTSD-208ENST00000636843 SH3TC2Q8TF17 1288 aa15.52■□□□□ 0.07
CTSD-208ENST00000636843 XAGE2Q96GT9 111 aa15.52■□□□□ 0.07
CTSD-208ENST00000636843 TRIM47Q96LD4 638 aa15.52■□□□□ 0.07
CTSD-208ENST00000636843 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
CTSD-208ENST00000636843 TFCP2Q12800 502 aa15.51■□□□□ 0.07
CTSD-208ENST00000636843 AAMPQ13685 434 aa15.51■□□□□ 0.07
CTSD-208ENST00000636843 GPAT2Q6NUI2 795 aa15.51■□□□□ 0.07
CTSD-208ENST00000636843 ERICH6Q7L0X2 663 aa15.51■□□□□ 0.07
CTSD-208ENST00000636843 FASTKD5Q7L8L6 764 aaKnown RBP15.51■□□□□ 0.07
CTSD-208ENST00000636843 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
CTSD-208ENST00000636843 RFX7Q2KHR2 1363 aa15.51■□□□□ 0.07
CTSD-208ENST00000636843 CTNND1O60716 968 aaKnown RBP15.5■□□□□ 0.07
CTSD-208ENST00000636843 PTPRAP18433 802 aa15.5■□□□□ 0.07
CTSD-208ENST00000636843 OSBPP22059 807 aa15.5■□□□□ 0.07
CTSD-208ENST00000636843 CTGFP29279 349 aa15.5■□□□□ 0.07
CTSD-208ENST00000636843 BTDP43251 543 aa15.5■□□□□ 0.07
CTSD-208ENST00000636843 HABP4Q5JVS0 413 aaKnown RBP15.5■□□□□ 0.07
CTSD-208ENST00000636843 SH3BP5LQ7L8J4 393 aa15.5■□□□□ 0.07
CTSD-208ENST00000636843 MROH7-TTC4A0A0A0MT08 1334 aa15.5■□□□□ 0.07
CTSD-208ENST00000636843 GPR75-ASB3A0A0A6YYF3 556 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 A0A0G2JLL6 359 aaPredicted RBP15.49■□□□□ 0.07
CTSD-208ENST00000636843 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
CTSD-208ENST00000636843 MAP4K4O95819 1239 aaPredicted RBP15.49■□□□□ 0.07
CTSD-208ENST00000636843 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
CTSD-208ENST00000636843 BCRP11274 1271 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 MECOMQ03112 1051 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 PRRT2Q7Z6L0 340 aaPredicted RBP15.49■□□□□ 0.07
CTSD-208ENST00000636843 RAET1EQ8TD07 263 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 SLC45A1Q9Y2W3 748 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 AFG3L2Q9Y4W6 797 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
CTSD-208ENST00000636843 DDTLA6NHG4 134 aaPredicted RBP15.48■□□□□ 0.07
CTSD-208ENST00000636843 GNAI2P04899 355 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 LDHCP07864 332 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 GRK4P32298 578 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 GSTO1P78417 241 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 CENPQQ7L2Z9 268 aaPredicted RBP15.48■□□□□ 0.07
CTSD-208ENST00000636843 NEUROD6Q96NK8 337 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
CTSD-208ENST00000636843 MYPNQ86TC9 1320 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 TBC1D12O60347 775 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
CTSD-208ENST00000636843 CYP2C8P10632 490 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 FCGRTP55899 365 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 RHBDL3P58872 404 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 PICALMQ13492 652 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 GORABQ5T7V8 394 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 HMG20BQ9P0W2 317 aa15.48■□□□□ 0.07
CTSD-208ENST00000636843 BRCA2P51587 3418 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 MS4A1P11836 297 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 TRIM27P14373 513 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 G3BP1Q13283 466 aaKnown RBP eCLIP15.47■□□□□ 0.07
CTSD-208ENST00000636843 ATF7IPQ6VMQ6 1270 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 GADL1Q6ZQY3 521 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 SPATA5Q8NB90 893 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 ZSWIM8A7E2V4 1837 aa15.47■□□□□ 0.07
CTSD-208ENST00000636843 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
CTSD-208ENST00000636843 MTFR1Q15390 333 aa15.46■□□□□ 0.07
CTSD-208ENST00000636843 ZNF384Q8TF68 577 aa15.46■□□□□ 0.07
CTSD-208ENST00000636843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
CTSD-208ENST00000636843 UBXN2AP68543 259 aa15.45■□□□□ 0.06
CTSD-208ENST00000636843 NSUN4Q96CB9 384 aaKnown RBP15.45■□□□□ 0.06
CTSD-208ENST00000636843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.45■□□□□ 0.063e-9■■■■□ 25.5
CTSD-208ENST00000636843 BIN2Q9UBW5 565 aaPredicted RBP15.45■□□□□ 0.06
CTSD-208ENST00000636843 DOCK2Q92608 1830 aa15.45■□□□□ 0.06
CTSD-208ENST00000636843 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 TRIM75PA6NK02 468 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 GJB1P08034 283 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 UQCRFS1P1P0C7P4 283 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 PRKCZQ05513 592 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 PI16Q6UXB8 463 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 SLAIN1Q8ND83 568 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
CTSD-208ENST00000636843 TBC1D2Q9BYX2 928 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 OSBPL5Q9H0X9 879 aaPredicted RBP15.44■□□□□ 0.06
CTSD-208ENST00000636843 RAI14Q9P0K7 980 aa15.44■□□□□ 0.06
CTSD-208ENST00000636843 AGTPBP1Q9UPW5 1226 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms