RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 LRP6O75581 1613 aa7.74□□□□□ -1.17
CLN8-210ENST00000636605 TRPM3Q9HCF6 1732 aaPredicted RBP7.73□□□□□ -1.17
CLN8-210ENST00000636605 EDC4Q6P2E9 1401 aaKnown RBP7.73□□□□□ -1.17
CLN8-210ENST00000636605 PTCD1O75127 700 aaKnown RBP7.73□□□□□ -1.17
CLN8-210ENST00000636605 EIF2AK2P19525 551 aaKnown RBP7.73□□□□□ -1.17
CLN8-210ENST00000636605 RXRBP28702 533 aa7.73□□□□□ -1.17
CLN8-210ENST00000636605 ZEB1P37275 1124 aaPredicted RBP7.73□□□□□ -1.17
CLN8-210ENST00000636605 RBM6P78332 1123 aaKnown RBP7.73□□□□□ -1.17
CLN8-210ENST00000636605 HFE2Q6ZVN8 426 aa7.73□□□□□ -1.17
CLN8-210ENST00000636605 PBXIP1Q96AQ6 731 aa7.73□□□□□ -1.17
CLN8-210ENST00000636605 SLC12A5Q9H2X9 1139 aa7.73□□□□□ -1.17
CLN8-210ENST00000636605 TTC21BQ7Z4L5 1316 aa7.73□□□□□ -1.17
CLN8-210ENST00000636605 ALS2Q96Q42 1657 aa7.73□□□□□ -1.17
CLN8-210ENST00000636605 ANKRD36BQ8N2N9 1353 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 LOC102724428A0A0B4J2F2 783 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 DLL1O00548 723 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 GCP02774 474 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 PSAPP07602 524 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 HSPA5P11021 654 aaKnown RBP7.72□□□□□ -1.17
CLN8-210ENST00000636605 SIK1P57059 783 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 PRSS36Q5K4E3 855 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 UNC5CLQ8IV45 518 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 PLD4Q96BZ4 506 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 NSUN5Q96P11 429 aaKnown RBP7.72□□□□□ -1.17
CLN8-210ENST00000636605 PRDM11Q9NQV5 511 aa7.72□□□□□ -1.17
CLN8-210ENST00000636605 SSH2Q76I76 1423 aa7.71□□□□□ -1.17
CLN8-210ENST00000636605 MKNK1Q9BUB5 465 aa7.71□□□□□ -1.18
CLN8-210ENST00000636605 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
CLN8-210ENST00000636605 RGS17Q9UGC6 210 aaPredicted RBP7.71□□□□□ -1.18
CLN8-210ENST00000636605 USP19O94966 1318 aa7.71□□□□□ -1.18
CLN8-210ENST00000636605 A0A1W2PP64 1363 aa7.71□□□□□ -1.18
CLN8-210ENST00000636605 CPDO75976 1380 aa7.71□□□□□ -1.18
CLN8-210ENST00000636605 USP31Q70CQ4 1352 aa7.71□□□□□ -1.18
CLN8-210ENST00000636605 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
CLN8-210ENST00000636605 MARF1Q9Y4F3 1742 aaKnown RBP7.7□□□□□ -1.18
CLN8-210ENST00000636605 AKAP12Q02952 1782 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 FAM83GA6ND36 823 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 J3QW42 95 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 NOS3P29474 1203 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 EVA1CP58658 441 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 IGF2-ASQ6U949 168 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLN8-210ENST00000636605 OR13H1Q8NG92 308 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 COG3Q96JB2 828 aa7.7□□□□□ -1.18
CLN8-210ENST00000636605 SLIT2O94813 1529 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 ZAP70P43403 619 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 VPS72Q15906 364 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 NUTM2GQ5VZR2 741 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 WFDC12Q8WWY7 111 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 SRA1Q9HD15 236 aaKnown RBP7.69□□□□□ -1.18
CLN8-210ENST00000636605 BTG4Q9NY30 223 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 CGNL1Q0VF96 1302 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 KIAA0232Q92628 1395 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 NWD2Q9ULI1 1742 aa7.69□□□□□ -1.18
CLN8-210ENST00000636605 COL14A1Q05707 1796 aaKnown RBP7.69□□□□□ -1.18
CLN8-210ENST00000636605 ZBTB39O15060 712 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 ZC3H6P61129 1189 aaKnown RBP7.68□□□□□ -1.18
CLN8-210ENST00000636605 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
CLN8-210ENST00000636605 COL13A1Q5TAT6 717 aaPredicted RBP7.68□□□□□ -1.18
CLN8-210ENST00000636605 PIK3R5Q8WYR1 880 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 TP53INP1Q96A56 240 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 POLR3GLQ9BT43 218 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 FAM13BQ9NYF5 915 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 STIM2Q9P246 746 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 CCDC9Q9Y3X0 531 aaKnown RBP7.68□□□□□ -1.18
CLN8-210ENST00000636605 MON2Q7Z3U7 1717 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 AATKQ6ZMQ8 1374 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 BCL9LQ86UU0 1499 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 CD163L1Q9NR16 1453 aa7.68□□□□□ -1.18
CLN8-210ENST00000636605 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.67□□□□□ -1.18
CLN8-210ENST00000636605 GHRHP01286 108 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 Q6ZS46 218 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 ARHGEF25Q86VW2 580 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 MEGF10Q96KG7 1140 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 SERPINA10Q9UK55 444 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 THRAP3Q9Y2W1 955 aaKnown RBP7.67□□□□□ -1.18
CLN8-210ENST00000636605 ATRNO75882 1429 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 SLIT3O75094 1523 aa7.67□□□□□ -1.18
CLN8-210ENST00000636605 ABCA3Q99758 1704 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 TM4SF5O14894 197 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 KIF4AO95239 1232 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 IREB2P48200 963 aaKnown RBP7.66□□□□□ -1.18
CLN8-210ENST00000636605 SETDB1Q15047 1291 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 NME9Q86XW9 330 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 DZIP1LQ8IYY4 767 aaKnown RBP7.66□□□□□ -1.18
CLN8-210ENST00000636605 CACTIN-AS1Q8N1I8 211 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 TRIM33Q9UPN9 1127 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 KNSTRNQ9Y448 316 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 NSD2O96028 1365 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 ABCC6O95255 1503 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 NRKQ7Z2Y5 1582 aa7.66□□□□□ -1.18
CLN8-210ENST00000636605 PHRF1Q9P1Y6 1649 aaKnown RBP7.66□□□□□ -1.18
CLN8-210ENST00000636605 PIK3C2AO00443 1686 aa7.65□□□□□ -1.18
CLN8-210ENST00000636605 FYB1O15117 783 aa7.65□□□□□ -1.18
CLN8-210ENST00000636605 ATP2B4P23634 1241 aa7.65□□□□□ -1.18
CLN8-210ENST00000636605 ARTNQ5T4W7 220 aa7.65□□□□□ -1.18
CLN8-210ENST00000636605 KIF24Q5T7B8 1368 aa7.65□□□□□ -1.18
CLN8-210ENST00000636605 SPATA31A5Q5VU36 1347 aa7.65□□□□□ -1.18
CLN8-210ENST00000636605 GDF6Q6KF10 455 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms