RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 CA12O43570 354 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 LDHCP07864 332 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 VGLL4Q14135 290 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 SPRYD7Q5W111 196 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
SRP54-AS1-205ENST00000636540 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 GJA5P36382 358 aa13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 MKRN3Q13064 507 aaKnown RBP13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 PICALMQ13492 652 aa13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 SH3BP5LQ7L8J4 393 aa13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 WRNIP1Q96S55 665 aa13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
SRP54-AS1-205ENST00000636540 ATP5JP18859 108 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 LBX1P52954 281 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 AAMPQ13685 434 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TMED8Q6PL24 325 aaPredicted RBP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SH3RF3Q8TEJ3 882 aaPredicted RBP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 BCL11AQ9H165 835 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ELP3Q9H9T3 547 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 AATFQ9NY61 560 aaKnown RBP eCLIP13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SNCAIPQ9Y6H5 919 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.25
SRP54-AS1-205ENST00000636540 FLT1P17948 1338 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 DDTLA6NHG4 134 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PLCG2P16885 1265 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 CYP7A1P22680 504 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PPP4CP60510 307 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SREBF2Q12772 1141 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MAP3K12Q12852 859 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 HDAC1Q13547 482 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 COL13A1Q5TAT6 717 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TEX11Q8IYF3 940 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MAGEB6Q8N7X4 407 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SLC10A4Q96EP9 437 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 HAUS7Q99871 368 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 OSBPL5Q9H0X9 879 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 CSADQ9Y600 493 aa13.51□□□□□ -0.25
SRP54-AS1-205ENST00000636540 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SPDYE5A6NIY4 337 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 GOLIM4O00461 696 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 BAG3O95817 575 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PDE6AP16499 860 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 INPP5BP32019 993 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MIGA2Q7L4E1 593 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 BOLA2Q9H3K6 86 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PAG1Q9NWQ8 432 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ZNF112Q9UJU3 913 aa13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MYH8P13535 1937 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 BAZ2AQ9UIF9 1905 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MANSC4A6NHS7 340 aaPredicted RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TM4SF4P48230 202 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 NOL9Q5SY16 702 aaKnown RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 RNF186Q9NXI6 227 aa13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TCRBV5S4A2TA0A5A2 114 aa13.48□□□□□ -0.25
SRP54-AS1-205ENST00000636540 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
SRP54-AS1-205ENST00000636540 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
SRP54-AS1-205ENST00000636540 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 IGF2BP3O00425 579 aaKnown RBP eCLIP13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TRPA1O75762 1119 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SLURP2P0DP57 97 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 SLC9C2Q5TAH2 1124 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 TGFBRAP1Q8WUH2 860 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 GCC1Q96CN9 775 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 MS4A4AQ96JQ5 239 aa13.47□□□□□ -0.25
SRP54-AS1-205ENST00000636540 CFHR5Q9BXR6 569 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms