RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 TCEAL8Q8IYN2 117 aa9.48□□□□□ -0.89
SMARCA2-243ENST00000635590 NOB1Q9ULX3 412 aaKnown RBP9.48□□□□□ -0.89
SMARCA2-243ENST00000635590 PTPRGP23470 1445 aa9.48□□□□□ -0.89
SMARCA2-243ENST00000635590 ADGRL1O94910 1474 aa9.48□□□□□ -0.89
SMARCA2-243ENST00000635590 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
SMARCA2-243ENST00000635590 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 RAPGEF3O95398 923 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 MLC1Q15049 377 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 EEPD1Q7L9B9 569 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 NCOA5Q9HCD5 579 aaKnown RBP9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 ZDHHC3Q9NYG2 299 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 PTGIRP43119 386 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 FAM102BQ5T8I3 360 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 WDR78Q5VTH9 848 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 NXNQ6DKJ4 435 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 TTC6Q86TZ1 520 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 FAM9BQ8IZU0 186 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 HOOK2Q96ED9 719 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 MTMR8Q96EF0 704 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 KIF2CQ99661 725 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 MIR1-1HGQ9H1L0 117 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 IL21Q9HBE4 155 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 CASS4Q9NQ75 786 aa9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 GPC6Q9Y625 555 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-243ENST00000635590 PHLDB1Q86UU1 1377 aa9.46□□□□□ -0.89
SMARCA2-243ENST00000635590 CILPO75339 1184 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 C4orf17Q53FE4 359 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 ZC3H12BQ5HYM0 836 aaKnown RBP9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 HGSNATQ68CP4 663 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 NECAB2Q7Z6G3 386 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 NLRP8Q86W28 1048 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 CCNJLQ8IV13 435 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 CCDC8Q9H0W5 538 aaPredicted RBP9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.9
SMARCA2-243ENST00000635590 CCDC163A0A0D9SF12 145 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 POTEMA6NI47 508 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 EGFRP00533 1210 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 ITKQ08881 620 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 RAPGEF1Q13905 1077 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 POTEGQ6S5H5 508 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 LHFPL2Q6ZUX7 228 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 LRRTM3Q86VH5 581 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 RUSC1Q9BVN2 902 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 ZFYVE1Q9HBF4 777 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 AASDHPPTQ9NRN7 309 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 SLC5A4Q9NY91 659 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 SWAP70Q9UH65 585 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 DNAJC25-GNG10A0A024R161 153 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 CPEP16870 476 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 L1CAMP32004 1257 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 CNNM4Q6P4Q7 775 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 GPATCH11Q8N954 259 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 PPCSQ9HAB8 311 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 TAGLN3Q9UI15 199 aa9.45□□□□□ -0.9
SMARCA2-243ENST00000635590 GLI2P10070 1586 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 ABCC2Q92887 1545 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 E2F8A0AVK6 867 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 GOLGA6CA6NDK9 693 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 GOLGA6BA6NDN3 693 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 GOLGA6DP0CG33 693 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 GRIA4P48058 902 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 DGKHQ86XP1 1220 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 AMOTL1Q8IY63 956 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 IFNL3Q8IZI9 196 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 MAGEB6Q8N7X4 407 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 YIPF4Q9BSR8 244 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 EHMT1Q9H9B1 1298 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 PTPRHQ9HD43 1115 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 GOLGA6AQ9NYA3 693 aa9.44□□□□□ -0.9
SMARCA2-243ENST00000635590 ASXL2Q76L83 1435 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 IGF1RP08069 1367 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 PLD2O14939 933 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 SIAH2O43255 324 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 EPB42P16452 691 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 LMNB1P20700 586 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 CCNFP41002 786 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 FNDC3BQ53EP0 1204 aaKnown RBP9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 PLA2G2CQ5R387 149 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 BICDL1Q6ZP65 573 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 PASD1Q8IV76 773 aa9.43□□□□□ -0.9
SMARCA2-243ENST00000635590 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms