RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	SH3TC2	Q8TF17	1288 aa		27.6	■■■□□ 2.01
SRRM2-231	ENST00000630499	DDTL	A6NHG4	134 aa	Predicted RBP	27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	TRIM27	P14373	513 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	PRMT2	P55345	433 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	RHBDL3	P58872	404 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	KIF22	Q14807	665 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	TMEM106C	Q9BVX2	250 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	MROH7-TTC4	A0A0A0MT08	1334 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	CEP290	O15078	2479 aa		27.59	■■■□□ 2.01
SRRM2-231	ENST00000630499	BCR	P11274	1271 aa		27.58	■■■□□ 2.01
SRRM2-231	ENST00000630499	SCYL3	Q8IZE3	742 aa		27.58	■■■□□ 2.01
SRRM2-231	ENST00000630499	AKAP2	Q9Y2D5	859 aa		27.58	■■■□□ 2.01
SRRM2-231	ENST00000630499	GPR75-ASB3	A0A0A6YYF3	556 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499		A0A0G2JLL6	359 aa	Predicted RBP	27.57	■■■□□ 2
SRRM2-231	ENST00000630499	PTPRA	P18433	802 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499	MECOM	Q03112	1051 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499	MVP	Q14764	893 aa	Known RBP	27.57	■■■□□ 2
SRRM2-231	ENST00000630499	PRRT2	Q7Z6L0	340 aa	Predicted RBP	27.57	■■■□□ 2
SRRM2-231	ENST00000630499	DZIP1	Q86YF9	867 aa	Known RBP	27.57	■■■□□ 2
SRRM2-231	ENST00000630499	HMG20B	Q9P0W2	317 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499	ABCF2	Q9UG63	623 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499	SRRD	Q9UH36	339 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499	AFG3L2	Q9Y4W6	797 aa		27.57	■■■□□ 2
SRRM2-231	ENST00000630499	RANBP2	P49792	3224 aa	Known RBP	27.56	■■■□□ 2
SRRM2-231	ENST00000630499	NPM3	O75607	178 aa	Known RBP	27.56	■■■□□ 2
SRRM2-231	ENST00000630499	BTD	P43251	543 aa		27.56	■■■□□ 2
SRRM2-231	ENST00000630499	OSBP	P22059	807 aa		27.55	■■■□□ 2
SRRM2-231	ENST00000630499	PSMC4	P43686	418 aa		27.55	■■■□□ 2
SRRM2-231	ENST00000630499	SPTY2D1	Q68D10	685 aa	Predicted RBP	27.55	■■■□□ 2
SRRM2-231	ENST00000630499	PI16	Q6UXB8	463 aa		27.55	■■■□□ 2
SRRM2-231	ENST00000630499	COL2A1	P02458	1487 aa	Predicted RBP	27.55	■■■□□ 2
SRRM2-231	ENST00000630499	PNMA6E	A0A0J9YXQ4	647 aa		27.54	■■■□□ 2
SRRM2-231	ENST00000630499	BCAR3	O75815	825 aa		27.54	■■■□□ 2
SRRM2-231	ENST00000630499	ARID4A	P29374	1257 aa	Predicted RBP	27.54	■■■□□ 2
SRRM2-231	ENST00000630499	ATF7IP	Q6VMQ6	1270 aa		27.54	■■■□□ 2
SRRM2-231	ENST00000630499	SLF2	Q8IX21	1173 aa		27.54	■■■□□ 2
SRRM2-231	ENST00000630499	GCC1	Q96CN9	775 aa		27.54	■■■□□ 2
SRRM2-231	ENST00000630499	ZHX2	Q9Y6X8	837 aa		27.54	■■■□□ 2
SRRM2-231	ENST00000630499	SIPA1L1	O43166	1804 aa		27.53	■■■□□ 2
SRRM2-231	ENST00000630499	ATAD5	Q96QE3	1844 aa		27.53	■■■□□ 2
SRRM2-231	ENST00000630499	CYP2C8	P10632	490 aa		27.53	■■■□□ 2
SRRM2-231	ENST00000630499	NSUN4	Q96CB9	384 aa	Known RBP	27.53	■■■□□ 2
SRRM2-231	ENST00000630499	PARK7	Q99497	189 aa	Known RBP	27.53	■■■□□ 2
SRRM2-231	ENST00000630499	LOC285556	D6RIA3	1793 aa		27.53	■■■□□ 2
SRRM2-231	ENST00000630499	ERICH6	Q7L0X2	663 aa		27.52	■■■□□ 2
SRRM2-231	ENST00000630499	SHISA4	Q96DD7	197 aa		27.52	■■■□□ 2
SRRM2-231	ENST00000630499	MAST2	Q6P0Q8	1798 aa		27.52	■■■□□ 2
SRRM2-231	ENST00000630499	CDK5RAP2	Q96SN8	1893 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	TBC1D12	O60347	775 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	CTNND1	O60716	968 aa	Known RBP	27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	GNAI2	P04899	355 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	MTFR1	Q15390	333 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	SLC4A8	Q2Y0W8	1093 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	HABP4	Q5JVS0	413 aa	Known RBP	27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	SPATA5	Q8NB90	893 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	SLC45A1	Q9Y2W3	748 aa		27.51	■■□□□ 1.99
SRRM2-231	ENST00000630499	IPO8	O15397	1037 aa	Known RBP	27.5	■■□□□ 1.99
SRRM2-231	ENST00000630499	MYC	P01106	439 aa	Predicted RBP	27.5	■■□□□ 1.99
SRRM2-231	ENST00000630499	PICALM	Q13492	652 aa		27.5	■■□□□ 1.99
SRRM2-231	ENST00000630499	TBC1D9	Q6ZT07	1266 aa		27.5	■■□□□ 1.99
SRRM2-231	ENST00000630499	FASTKD5	Q7L8L6	764 aa	Known RBP	27.5	■■□□□ 1.99
SRRM2-231	ENST00000630499	PICK1	Q9NRD5	415 aa		27.5	■■□□□ 1.99
SRRM2-231	ENST00000630499	MYO5A	Q9Y4I1	1855 aa	Known RBP	27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	SZT2	Q5T011	3432 aa		27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	FOCAD	Q5VW36	1801 aa		27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	ECM2	O94769	699 aa	Predicted RBP	27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	MCAM	P43121	646 aa		27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	NEUROD6	Q96NK8	337 aa		27.49	■■□□□ 1.99
SRRM2-231	ENST00000630499	MYPN	Q86TC9	1320 aa		27.48	■■□□□ 1.99
SRRM2-231	ENST00000630499	MAP4K4	O95819	1239 aa	Predicted RBP	27.48	■■□□□ 1.99
SRRM2-231	ENST00000630499	FMNL1	O95466	1100 aa	Predicted RBP	27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	HOXD10	P28358	340 aa		27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	GRK4	P32298	578 aa		27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	PRKCZ	Q05513	592 aa		27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	POLA2	Q14181	598 aa		27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	UBE2Q1	Q7Z7E8	422 aa		27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	CCDC84	Q86UT8	332 aa	Predicted RBP	27.47	■■□□□ 1.99
SRRM2-231	ENST00000630499	DOCK3	Q8IZD9	2030 aa		27.46	■■□□□ 1.99
SRRM2-231	ENST00000630499	CLUAP1	Q96AJ1	413 aa		27.46	■■□□□ 1.99
SRRM2-231	ENST00000630499	FAM196B	A6NMK8	535 aa		27.45	■■□□□ 1.98
SRRM2-231	ENST00000630499	RRP1B	Q14684	758 aa	Known RBP	27.45	■■□□□ 1.98
SRRM2-231	ENST00000630499	TMEM57	Q8N5G2	664 aa		27.45	■■□□□ 1.98
SRRM2-231	ENST00000630499	FRAT1	Q92837	279 aa	Predicted RBP	27.45	■■□□□ 1.98
SRRM2-231	ENST00000630499	OSBPL5	Q9H0X9	879 aa	Predicted RBP	27.45	■■□□□ 1.98
SRRM2-231	ENST00000630499	GABRQ	Q9UN88	632 aa		27.45	■■□□□ 1.98
SRRM2-231	ENST00000630499	FCGRT	P55899	365 aa		27.44	■■□□□ 1.98
SRRM2-231	ENST00000630499	GSTO1	P78417	241 aa		27.44	■■□□□ 1.98
SRRM2-231	ENST00000630499	GADL1	Q6ZQY3	521 aa		27.44	■■□□□ 1.98
SRRM2-231	ENST00000630499	RAET1E	Q8TD07	263 aa		27.44	■■□□□ 1.98
SRRM2-231	ENST00000630499	GPR108	Q9NPR9	543 aa		27.44	■■□□□ 1.98
SRRM2-231	ENST00000630499	TRIM75P	A6NK02	468 aa		27.43	■■□□□ 1.98
SRRM2-231	ENST00000630499	LDHC	P07864	332 aa		27.43	■■□□□ 1.98
SRRM2-231	ENST00000630499	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.43	■■□□□ 1.98	4e-9	■□□□□ 9.4
SRRM2-231	ENST00000630499	SSH3	Q8TE77	659 aa		27.43	■■□□□ 1.98
SRRM2-231	ENST00000630499	AGTPBP1	Q9UPW5	1226 aa		27.43	■■□□□ 1.98
SRRM2-231	ENST00000630499	UQCRFS1P1	P0C7P4	283 aa		27.42	■■□□□ 1.98
SRRM2-231	ENST00000630499	TREML2	Q5T2D2	321 aa		27.42	■■□□□ 1.98
SRRM2-231	ENST00000630499	GJB1	P08034	283 aa		27.41	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms