RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
SCN8A-209ENST00000627620 VPS16Q9H269 839 aa14.37□□□□□ -0.11
SCN8A-209ENST00000627620 PICK1Q9NRD5 415 aa14.37□□□□□ -0.11
SCN8A-209ENST00000627620 ZHX1Q9UKY1 873 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-209ENST00000627620 CCDC169A6NNP5 214 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 SMTNP53814 917 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 ZBTB16Q05516 673 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 ANKS4BQ8N8V4 417 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 IGSF22Q8N9C0 903 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 WDR66Q8TBY9 1149 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 ORAI2Q96SN7 254 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 LPIN2Q92539 896 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 TXNDC16Q9P2K2 825 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCN8A-209ENST00000627620 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
SCN8A-209ENST00000627620 SEL1L2Q5TEA6 688 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 MAST3O60307 1309 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 SGSM2O43147 1006 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 KBTBD3Q8NAB2 608 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 LEO1Q8WVC0 666 aaPredicted RBP14.36□□□□□ -0.11
SCN8A-209ENST00000627620 ZBTB9Q96C00 473 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 OTUD7BQ6GQQ9 843 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 RAB3IL1Q8TBN0 382 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
SCN8A-209ENST00000627620 TCOF1Q13428 1488 aaKnown RBP14.35□□□□□ -0.11
SCN8A-209ENST00000627620 MAK16Q9BXY0 300 aaKnown RBP14.35□□□□□ -0.11
SCN8A-209ENST00000627620 CCDC87Q9NVE4 849 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 CAPN2P17655 700 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 MNAT1P51948 309 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 TTC38Q5R3I4 469 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 APBB1IPQ7Z5R6 666 aaPredicted RBP14.35□□□□□ -0.11
SCN8A-209ENST00000627620 KIFAP3Q92845 792 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 POLR2DO15514 142 aaKnown RBP14.35□□□□□ -0.11
SCN8A-209ENST00000627620 TAF12Q16514 161 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
SCN8A-209ENST00000627620 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 PNMA6EA0A0J9YXQ4 647 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 TNFAIP3P21580 790 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 GCKRQ14397 625 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 ZYXQ15942 572 aaKnown RBP14.35□□□□□ -0.11
SCN8A-209ENST00000627620 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
SCN8A-209ENST00000627620 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 GLT8D2Q9H1C3 349 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 STK32BQ9NY57 414 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 VPS18Q9P253 973 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 FAM169AQ9Y6X4 670 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 SPATA5Q8NB90 893 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 SMC6Q96SB8 1091 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 MYL10Q9BUA6 226 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 CUTAO60888 179 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 MSL1Q68DK7 614 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 CSGALNACT2Q8N6G5 542 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 KCNK9Q9NPC2 374 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 CALUO43852 315 aaPredicted RBP14.34□□□□□ -0.11
SCN8A-209ENST00000627620 DNAJC21Q5F1R6 531 aaKnown RBP14.34□□□□□ -0.11
SCN8A-209ENST00000627620 DPP8Q6V1X1 898 aaPredicted RBP14.34□□□□□ -0.11
SCN8A-209ENST00000627620 KIAA1524Q8TCG1 905 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
SCN8A-209ENST00000627620 STX10O60499 249 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 TRIM14Q14142 442 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 CERS3Q8IU89 383 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 TIGD1Q96MW7 591 aa14.34□□□□□ -0.11
SCN8A-209ENST00000627620 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCN8A-209ENST00000627620 COL17A1Q9UMD9 1497 aaPredicted RBP14.33□□□□□ -0.11
SCN8A-209ENST00000627620 ZEB2O60315 1214 aa14.33□□□□□ -0.11
SCN8A-209ENST00000627620 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.11
SCN8A-209ENST00000627620 CLSTN2Q9H4D0 955 aa14.33□□□□□ -0.11
SCN8A-209ENST00000627620 SPOPO43791 374 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 DNAJC10Q8IXB1 793 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 JAKMIP2Q96AA8 810 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 IFT74Q96LB3 600 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 TUBBP07437 444 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 SLC1A4P43007 532 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 ADCY7P51828 1080 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 NONOQ15233 471 aaKnown RBP eCLIP14.33□□□□□ -0.12
SCN8A-209ENST00000627620 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 CCDC121Q6ZUS5 278 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 ARFGAP2Q8N6H7 521 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 PEG3Q9GZU2 1588 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 ARHGEF35A5YM69 484 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 CETN3O15182 167 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 MYCLP12524 364 aaPredicted RBP14.33□□□□□ -0.12
SCN8A-209ENST00000627620 ZAP70P43403 619 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 CPLX4Q7Z7G2 160 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 CCDC24Q8N4L8 307 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 CCDC26Q8TAB7 109 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 PHKBQ93100 1093 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 MROH5Q6ZUA9 1318 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 ZNF532Q9HCE3 1301 aa14.33□□□□□ -0.12
SCN8A-209ENST00000627620 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.32□□□□□ -0.12
SCN8A-209ENST00000627620 UBLCP1Q8WVY7 318 aaPredicted RBP14.32□□□□□ -0.12
SCN8A-209ENST00000627620 LRWD1Q9UFC0 647 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms