RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 AFG3L2Q9Y4W6 797 aa17.66■□□□□ 0.42
SNX1-214ENST00000625244 PTPRAP18433 802 aa17.65■□□□□ 0.42
SNX1-214ENST00000625244 NFIAQ12857 509 aa17.65■□□□□ 0.42
SNX1-214ENST00000625244 VPS37DQ86XT2 251 aa17.65■□□□□ 0.42
SNX1-214ENST00000625244 DNAAF4Q8WXU2 420 aa17.65■□□□□ 0.42
SNX1-214ENST00000625244 SEMA6BQ9H3T3 888 aa17.65■□□□□ 0.42
SNX1-214ENST00000625244 PHF20L1A8MW92 1017 aa17.64■□□□□ 0.41
SNX1-214ENST00000625244 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
SNX1-214ENST00000625244 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNX1-214ENST00000625244 HHIPL2Q6UWX4 724 aa17.64■□□□□ 0.41
SNX1-214ENST00000625244 MYLIPQ8WY64 445 aa17.64■□□□□ 0.41
SNX1-214ENST00000625244 PUS3Q9BZE2 481 aaKnown RBP17.64■□□□□ 0.41
SNX1-214ENST00000625244 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 PLA2G5P39877 138 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
SNX1-214ENST00000625244 FLIIQ13045 1269 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 RALBP1Q15311 655 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 FAM110CQ1W6H9 321 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 ZFPM1Q8IX07 1006 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 SCYL3Q8IZE3 742 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 TRIB2Q92519 343 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 PICK1Q9NRD5 415 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 BDP1A6H8Y1 2624 aa17.63■□□□□ 0.41
SNX1-214ENST00000625244 FKBP5Q13451 457 aaPredicted RBP17.62■□□□□ 0.41
SNX1-214ENST00000625244 MAP3K21Q5TCX8 1036 aa17.62■□□□□ 0.41
SNX1-214ENST00000625244 CDC42EP5Q6NZY7 148 aa17.62■□□□□ 0.41
SNX1-214ENST00000625244 FAM198AQ9UFP1 575 aa17.62■□□□□ 0.41
SNX1-214ENST00000625244 TRIM75PA6NK02 468 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 APAF1O14727 1248 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 PRKAR2AP13861 404 aaKnown RBP17.61■□□□□ 0.41
SNX1-214ENST00000625244 TREML2Q5T2D2 321 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 TSR2Q969E8 191 aaKnown RBP17.61■□□□□ 0.41
SNX1-214ENST00000625244 LBHD1Q9BQE6 289 aaPredicted RBP17.61■□□□□ 0.41
SNX1-214ENST00000625244 TTYH1Q9H313 450 aaPredicted RBP17.61■□□□□ 0.41
SNX1-214ENST00000625244 AGTPBP1Q9UPW5 1226 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 SUGT1Q9Y2Z0 365 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 MAST3O60307 1309 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 ATRNL1Q5VV63 1379 aa17.61■□□□□ 0.41
SNX1-214ENST00000625244 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
SNX1-214ENST00000625244 DAGLAQ9Y4D2 1042 aa17.6■□□□□ 0.41
SNX1-214ENST00000625244 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
SNX1-214ENST00000625244 SLURP2P0DP57 97 aa17.59■□□□□ 0.41
SNX1-214ENST00000625244 FOSL2P15408 326 aa17.59■□□□□ 0.41
SNX1-214ENST00000625244 CAVIN4Q5BKX8 364 aa17.59■□□□□ 0.41
SNX1-214ENST00000625244 CCDC84Q86UT8 332 aaPredicted RBP17.59■□□□□ 0.41
SNX1-214ENST00000625244 FAM122AQ96E09 287 aa17.59■□□□□ 0.41
SNX1-214ENST00000625244 CYP2B6P20813 491 aa17.58■□□□□ 0.4
SNX1-214ENST00000625244 DIXDC1Q155Q3 683 aa17.58■□□□□ 0.4
SNX1-214ENST00000625244 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.4
SNX1-214ENST00000625244 LHX8Q68G74 356 aa17.58■□□□□ 0.4
SNX1-214ENST00000625244 NCOR1O75376 2440 aa17.58■□□□□ 0.4
SNX1-214ENST00000625244 PTPRFP10586 1907 aa17.57■□□□□ 0.4
SNX1-214ENST00000625244 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
SNX1-214ENST00000625244 SHHQ15465 462 aa17.57■□□□□ 0.4
SNX1-214ENST00000625244 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
SNX1-214ENST00000625244 BEND3Q5T5X7 828 aa17.57■□□□□ 0.4
SNX1-214ENST00000625244 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
SNX1-214ENST00000625244 F6X3S4 739 aa17.56■□□□□ 0.4
SNX1-214ENST00000625244 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
SNX1-214ENST00000625244 C9orf50Q5SZB4 431 aa17.56■□□□□ 0.4
SNX1-214ENST00000625244 USP38Q8NB14 1042 aa17.56■□□□□ 0.4
SNX1-214ENST00000625244 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
SNX1-214ENST00000625244 MYBBP1AQ9BQG0 1328 aaKnown RBP17.55■□□□□ 0.4
SNX1-214ENST00000625244 TMEM265A0A087WTH1 108 aa17.55■□□□□ 0.4
SNX1-214ENST00000625244 CCND3P30281 292 aaPredicted RBP17.55■□□□□ 0.4
SNX1-214ENST00000625244 CACNB2Q08289 660 aaPredicted RBP17.55■□□□□ 0.4
SNX1-214ENST00000625244 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
SNX1-214ENST00000625244 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
SNX1-214ENST00000625244 LRRFIP2Q9Y608 721 aaKnown RBP17.55■□□□□ 0.4
SNX1-214ENST00000625244 PLXNB2O15031 1838 aa17.55■□□□□ 0.4
SNX1-214ENST00000625244 XIRP2A4UGR9 3374 aa17.54■□□□□ 0.4
SNX1-214ENST00000625244 GRM8O00222 908 aa17.54■□□□□ 0.4
SNX1-214ENST00000625244 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
SNX1-214ENST00000625244 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
SNX1-214ENST00000625244 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
SNX1-214ENST00000625244 SENP6Q9GZR1 1112 aaPredicted RBP17.54■□□□□ 0.4
SNX1-214ENST00000625244 PHIPQ8WWQ0 1821 aa17.54■□□□□ 0.4
SNX1-214ENST00000625244 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
SNX1-214ENST00000625244 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
SNX1-214ENST00000625244 SMAD3P84022 425 aaKnown RBP17.53■□□□□ 0.4
SNX1-214ENST00000625244 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
SNX1-214ENST00000625244 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
SNX1-214ENST00000625244 PEX10O60683 326 aa17.52■□□□□ 0.4
SNX1-214ENST00000625244 PDE8BO95263 885 aa17.52■□□□□ 0.4
SNX1-214ENST00000625244 RGS3P49796 1198 aa17.52■□□□□ 0.4
SNX1-214ENST00000625244 ATN1P54259 1190 aaPredicted RBP17.52■□□□□ 0.4
SNX1-214ENST00000625244 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
SNX1-214ENST00000625244 ASCC2Q9H1I8 757 aaPredicted RBP17.52■□□□□ 0.4
SNX1-214ENST00000625244 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
SNX1-214ENST00000625244 DDTLA6NHG4 134 aaPredicted RBP17.51■□□□□ 0.39
SNX1-214ENST00000625244 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
SNX1-214ENST00000625244 PRDX5P30044 214 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 MAP3K12Q12852 859 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 CCL14Q16627 93 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 NUDT12Q9BQG2 462 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
SNX1-214ENST00000625244 ENTPD3O75355 529 aa17.5■□□□□ 0.39
SNX1-214ENST00000625244 SPP2Q13103 211 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms