RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 KIF1BPQ96EK5 621 aa25.83■■□□□ 1.73
PMPCA-212ENST00000622209 POTEFA5A3E0 1075 aa25.82■■□□□ 1.72
PMPCA-212ENST00000622209 RGS3P49796 1198 aa25.82■■□□□ 1.72
PMPCA-212ENST00000622209 ARHGEF6Q15052 776 aa25.82■■□□□ 1.72
PMPCA-212ENST00000622209 PCDHB15Q9Y5E8 787 aa25.82■■□□□ 1.72
PMPCA-212ENST00000622209 PDS5AQ29RF7 1337 aaKnown RBP25.82■■□□□ 1.72
PMPCA-212ENST00000622209 TLR2O60603 784 aa25.81■■□□□ 1.72
PMPCA-212ENST00000622209 UQCRFS1P1P0C7P4 283 aa25.8■■□□□ 1.72
PMPCA-212ENST00000622209 SPTY2D1Q68D10 685 aaPredicted RBP25.8■■□□□ 1.72
PMPCA-212ENST00000622209 EAF2Q96CJ1 260 aaPredicted RBP25.8■■□□□ 1.72
PMPCA-212ENST00000622209 ZCCHC17Q9NP64 241 aaKnown RBP25.8■■□□□ 1.72
PMPCA-212ENST00000622209 GAKO14976 1311 aa25.8■■□□□ 1.72
PMPCA-212ENST00000622209 PDE4DIPQ5VU43 2346 aa25.8■■□□□ 1.72
PMPCA-212ENST00000622209 LAMB1P07942 1786 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 ECM2O94769 699 aaPredicted RBP25.79■■□□□ 1.72
PMPCA-212ENST00000622209 SLC34A2O95436 690 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 ARID4AP29374 1257 aaPredicted RBP25.79■■□□□ 1.72
PMPCA-212ENST00000622209 CCDC158Q5M9N0 1113 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 ZSCAN29Q8IWY8 852 aaPredicted RBP25.79■■□□□ 1.72
PMPCA-212ENST00000622209 SLF2Q8IX21 1173 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 ARMC5Q96C12 935 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 DBNDD2Q9BQY9 259 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 IDI2Q9BXS1 227 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 ARHGAP39Q9C0H5 1083 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 PTCH2Q9Y6C5 1203 aa25.79■■□□□ 1.72
PMPCA-212ENST00000622209 ENTPD3O75355 529 aa25.78■■□□□ 1.72
PMPCA-212ENST00000622209 BTDP43251 543 aa25.78■■□□□ 1.72
PMPCA-212ENST00000622209 PRPF38BQ5VTL8 546 aaKnown RBP25.78■■□□□ 1.72
PMPCA-212ENST00000622209 ERICH6Q7L0X2 663 aa25.78■■□□□ 1.72
PMPCA-212ENST00000622209 SH3BP5LQ7L8J4 393 aa25.78■■□□□ 1.72
PMPCA-212ENST00000622209 CLASRPQ8N2M8 674 aaKnown RBP25.78■■□□□ 1.72
PMPCA-212ENST00000622209 CCDC8Q9H0W5 538 aaPredicted RBP25.78■■□□□ 1.72
PMPCA-212ENST00000622209 DCTPP1Q9H773 170 aa25.78■■□□□ 1.72
PMPCA-212ENST00000622209 APBB1O00213 710 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 PDHXO00330 501 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 MECOMQ03112 1051 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 PICALMQ13492 652 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 KIF22Q14807 665 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 NOL9Q5SY16 702 aaKnown RBP25.77■■□□□ 1.72
PMPCA-212ENST00000622209 FAM163AQ96GL9 167 aaPredicted RBP25.77■■□□□ 1.72
PMPCA-212ENST00000622209 ZNF512BQ96KM6 892 aaPredicted RBP25.77■■□□□ 1.72
PMPCA-212ENST00000622209 IL1RAPL2Q9NP60 686 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 HMG20BQ9P0W2 317 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 CPA4Q9UI42 421 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
PMPCA-212ENST00000622209 KCNH4Q9UQ05 1017 aa25.77■■□□□ 1.72
PMPCA-212ENST00000622209 SLURP2P0DP57 97 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 TTC39AQ5SRH9 613 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 PI16Q6UXB8 463 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 TBC1D9Q6ZT07 1266 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 ANKRD23Q86SG2 305 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 AACSQ86V21 672 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 DDX4Q9NQI0 724 aaKnown RBP25.76■■□□□ 1.71
PMPCA-212ENST00000622209 MYH13Q9UKX3 1938 aa25.76■■□□□ 1.71
PMPCA-212ENST00000622209 DDTLA6NHG4 134 aaPredicted RBP25.75■■□□□ 1.71
PMPCA-212ENST00000622209 PHF20L1A8MW92 1017 aa25.75■■□□□ 1.71
PMPCA-212ENST00000622209 LACTBP83111 547 aaPredicted RBP25.75■■□□□ 1.71
PMPCA-212ENST00000622209 SLC9C1Q4G0N8 1177 aa25.75■■□□□ 1.71
PMPCA-212ENST00000622209 SPATA5Q8NB90 893 aa25.75■■□□□ 1.71
PMPCA-212ENST00000622209 CENPFP49454 3210 aa25.75■■□□□ 1.71
PMPCA-212ENST00000622209 MROH7-TTC4A0A0A0MT08 1334 aa25.74■■□□□ 1.71
PMPCA-212ENST00000622209 EN2P19622 333 aaPredicted RBP25.74■■□□□ 1.71
PMPCA-212ENST00000622209 MOGSQ13724 837 aa25.74■■□□□ 1.71
PMPCA-212ENST00000622209 C17orf99Q6UX52 265 aa25.74■■□□□ 1.71
PMPCA-212ENST00000622209 EXOC6Q8TAG9 804 aa25.74■■□□□ 1.71
PMPCA-212ENST00000622209 ZNF384Q8TF68 577 aa25.74■■□□□ 1.71
PMPCA-212ENST00000622209 LRRCC1Q9C099 1032 aa25.74■■□□□ 1.71
PMPCA-212ENST00000622209 ATRNL1Q5VV63 1379 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 MYCP01106 439 aaPredicted RBP25.73■■□□□ 1.71
PMPCA-212ENST00000622209 NBPF11Q86T75 865 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 ZNF333Q96JL9 665 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 TMEM106CQ9BVX2 250 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 PICK1Q9NRD5 415 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 TLR7Q9NYK1 1049 aaKnown RBP25.73■■□□□ 1.71
PMPCA-212ENST00000622209 RAI14Q9P0K7 980 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 ZHX2Q9Y6X8 837 aa25.73■■□□□ 1.71
PMPCA-212ENST00000622209 GPR75-ASB3A0A0A6YYF3 556 aa25.72■■□□□ 1.71
PMPCA-212ENST00000622209 CXCL11O14625 94 aa25.72■■□□□ 1.71
PMPCA-212ENST00000622209 IFIT2P09913 472 aaKnown RBP25.72■■□□□ 1.71
PMPCA-212ENST00000622209 MCAMP43121 646 aa25.72■■□□□ 1.71
PMPCA-212ENST00000622209 SCYL3Q8IZE3 742 aa25.72■■□□□ 1.71
PMPCA-212ENST00000622209 PTPRAP18433 802 aa25.71■■□□□ 1.71
PMPCA-212ENST00000622209 RHBDL3P58872 404 aa25.71■■□□□ 1.71
PMPCA-212ENST00000622209 HDAC1Q13547 482 aaPredicted RBP25.71■■□□□ 1.71
PMPCA-212ENST00000622209 RFX7Q2KHR2 1363 aa25.7■■□□□ 1.71
PMPCA-212ENST00000622209 LDHCP07864 332 aa25.7■■□□□ 1.7
PMPCA-212ENST00000622209 GSTO1P78417 241 aa25.7■■□□□ 1.7
PMPCA-212ENST00000622209 MAP3K10Q02779 954 aa25.7■■□□□ 1.7
PMPCA-212ENST00000622209 GPAT2Q6NUI2 795 aa25.7■■□□□ 1.7
PMPCA-212ENST00000622209 SH3TC2Q8TF17 1288 aa25.7■■□□□ 1.7
PMPCA-212ENST00000622209 NSUN4Q96CB9 384 aaKnown RBP25.7■■□□□ 1.7
PMPCA-212ENST00000622209 CYP2C8P10632 490 aa25.69■■□□□ 1.7
PMPCA-212ENST00000622209 CTGFP29279 349 aa25.69■■□□□ 1.7
PMPCA-212ENST00000622209 PSMC4P43686 418 aa25.69■■□□□ 1.7
PMPCA-212ENST00000622209 SLC4A8Q2Y0W8 1093 aa25.69■■□□□ 1.7
PMPCA-212ENST00000622209 SNRKQ9NRH2 765 aa25.69■■□□□ 1.7
PMPCA-212ENST00000622209 FMNL1O95466 1100 aaPredicted RBP25.68■■□□□ 1.7
PMPCA-212ENST00000622209 TRIM47Q96LD4 638 aa25.68■■□□□ 1.7
PMPCA-212ENST00000622209 LRP2BPQ9P2M1 347 aa25.68■■□□□ 1.7
PMPCA-212ENST00000622209 AFG3L2Q9Y4W6 797 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms