RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PRR36Q9H6K5 1346 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 SMAD7O15105 426 aaKnown RBP7.42□□□□□ -1.22
CPNE3-213ENST00000622183 ZNF862O60290 1169 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 ADAM11O75078 769 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 CD68P34810 354 aaPredicted RBP7.42□□□□□ -1.22
CPNE3-213ENST00000622183 RAB33AQ14088 237 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 FBXW10Q5XX13 1052 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 LRFN4Q6PJG9 635 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 HDXQ7Z353 690 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 FAM169BQ8N8A8 192 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 PLPPR2Q96GM1 343 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 TRIM55Q9BYV6 548 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 SIRPGQ9P1W8 387 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 TACC3Q9Y6A5 838 aa7.42□□□□□ -1.22
CPNE3-213ENST00000622183 DDX3YO15523 660 aaKnown RBP7.41□□□□□ -1.22
CPNE3-213ENST00000622183 GRIN3BO60391 1043 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 CANXP27824 592 aaKnown RBP7.41□□□□□ -1.22
CPNE3-213ENST00000622183 INPP5AQ14642 412 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 BMS1Q14692 1282 aaKnown RBP7.41□□□□□ -1.22
CPNE3-213ENST00000622183 NFE2L2Q16236 605 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 FOXD4L6Q3SYB3 417 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-213ENST00000622183 FOXD4L3Q6VB84 417 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-213ENST00000622183 WHAMMQ8TF30 809 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 HNRNPLLQ8WVV9 542 aaKnown RBP7.41□□□□□ -1.22
CPNE3-213ENST00000622183 MKL1Q969V6 931 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 KCNK4Q9NYG8 393 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 SYNGAP1Q96PV0 1343 aa7.41□□□□□ -1.22
CPNE3-213ENST00000622183 K7ELQ4 463 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-213ENST00000622183 HTR3BO95264 441 aa7.4□□□□□ -1.22
CPNE3-213ENST00000622183 DLGAP3O95886 979 aa7.4□□□□□ -1.22
CPNE3-213ENST00000622183 LIG1P18858 919 aa7.4□□□□□ -1.22
CPNE3-213ENST00000622183 LRRFIP1Q32MZ4 808 aaKnown RBP7.4□□□□□ -1.22
CPNE3-213ENST00000622183 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
CPNE3-213ENST00000622183 CYFIP1Q7L576 1253 aa7.4□□□□□ -1.22
CPNE3-213ENST00000622183 LSRQ86X29 649 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-213ENST00000622183 WDR89Q96FK6 387 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-213ENST00000622183 R3HCC1Q9Y3T6 440 aaKnown RBP7.4□□□□□ -1.22
CPNE3-213ENST00000622183 PCDHGC5Q9Y5F6 944 aa7.4□□□□□ -1.22
CPNE3-213ENST00000622183 CADPSQ9ULU8 1353 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 MEIS3P2A8K0S8 358 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 DLL1O00548 723 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 U2SURPO15042 1029 aaKnown RBP7.39□□□□□ -1.23
CPNE3-213ENST00000622183 WFS1O76024 890 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 RAC1P63000 192 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 FBXO11Q86XK2 927 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 WDR18Q9BV38 432 aa7.39□□□□□ -1.23
CPNE3-213ENST00000622183 CDK11AQ9UQ88 783 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-213ENST00000622183 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
CPNE3-213ENST00000622183 AOC2O75106 756 aa7.38□□□□□ -1.23
CPNE3-213ENST00000622183 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
CPNE3-213ENST00000622183 CASP7P55210 303 aa7.38□□□□□ -1.23
CPNE3-213ENST00000622183 ZNF746Q6NUN9 644 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-213ENST00000622183 LRP10Q7Z4F1 713 aa7.38□□□□□ -1.23
CPNE3-213ENST00000622183 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-213ENST00000622183 C19orf47Q8N9M1 422 aaKnown RBP7.38□□□□□ -1.23
CPNE3-213ENST00000622183 ELMO3Q96BJ8 720 aa7.38□□□□□ -1.23
CPNE3-213ENST00000622183 ENAMQ9NRM1 1142 aa7.38□□□□□ -1.23
CPNE3-213ENST00000622183 A0A0A0MRY4 1105 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 TLDC2A0PJX2 215 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 ERVK-24P63145 666 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 RING1Q06587 406 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 PDE4BQ07343 736 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 MLECQ14165 292 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 ZNF385CQ66K41 422 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-213ENST00000622183 NEDD1Q8NHV4 660 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 UBASH3BQ8TF42 649 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 TMEM40Q8WWA1 233 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 TRIM11Q96F44 468 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 MRFAP1L1Q96HT8 127 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 TM9SF2Q99805 663 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 RRAGCQ9HB90 399 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 ACTR10Q9NZ32 417 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 REV1Q9UBZ9 1251 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 TBX22Q9Y458 520 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 CORINQ9Y5Q5 1042 aa7.37□□□□□ -1.23
CPNE3-213ENST00000622183 DCDC2CA8MYV0 355 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 DUOXA2Q1HG44 320 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 EXOSC6Q5RKV6 272 aaKnown RBP7.36□□□□□ -1.23
CPNE3-213ENST00000622183 TMEM201Q5SNT2 666 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 LINC00114Q6XXX2 140 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 C12orf40Q86WS4 652 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 TAB3Q8N5C8 712 aaPredicted RBP7.36□□□□□ -1.23
CPNE3-213ENST00000622183 TMPRSS13Q9BYE2 586 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 ANTXR1Q9H6X2 564 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 GMIPQ9P107 970 aa7.36□□□□□ -1.23
CPNE3-213ENST00000622183 MEGF11A6BM72 1044 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 SPDYE3A6NKU9 549 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 PLCG1P19174 1290 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 ID3Q02535 119 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 RASA3Q14644 834 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 DDR2Q16832 855 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 RUFY4Q6ZNE9 571 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 CELF2-AS1Q8N7Q2 184 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 SRPK1Q96SB4 655 aaKnown RBP7.35□□□□□ -1.23
CPNE3-213ENST00000622183 RUSC1Q9BVN2 902 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 TNKS2Q9H2K2 1166 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 SUGCTQ9HAC7 445 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 RAD18Q9NS91 495 aa7.35□□□□□ -1.23
CPNE3-213ENST00000622183 SNTG2Q9NY99 539 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms