RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 BRAPQ7Z569 592 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 IFNL3Q8IZI9 196 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 TTLL6Q8N841 843 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 ERCC4Q92889 916 aaPredicted RBP10.49□□□□□ -0.73
GGA3-223ENST00000621870 TLR7Q9NYK1 1049 aaKnown RBP10.49□□□□□ -0.73
GGA3-223ENST00000621870 KDM5AP29375 1690 aaKnown RBP10.49□□□□□ -0.73
GGA3-223ENST00000621870 E7EWF7 191 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 NOP56O00567 594 aaKnown RBP10.49□□□□□ -0.73
GGA3-223ENST00000621870 KLHL40Q2TBA0 621 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 TEX35Q5T0J7 233 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 DCAF15Q66K64 600 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 SMIM5Q71RC9 77 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 FAM114A1Q8IWE2 563 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 SYNE4Q8N205 404 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 IQUBQ8NA54 791 aa10.49□□□□□ -0.73
GGA3-223ENST00000621870 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 ZMYM4Q5VZL5 1548 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 ESPNB1AK53 854 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 DDX39AO00148 427 aaKnown RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 FGAP02671 866 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 GPR101Q96P66 508 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 CERKLQ49MI3 558 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 BRDTQ58F21 947 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 CMTR1Q8N1G2 835 aaKnown RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 LRRC47Q8N1G4 583 aaKnown RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 CTNNBL1Q8WYA6 563 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 ARPP21Q9UBL0 812 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 JCADQ9P266 1359 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 A0A1B0GVL5 298 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 PSDA5PKW4 1024 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 ARID4AP29374 1257 aaPredicted RBP10.48□□□□□ -0.73
GGA3-223ENST00000621870 USP37Q86T82 979 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 HAUS7Q99871 368 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 KCNJ14Q9UNX9 436 aa10.48□□□□□ -0.73
GGA3-223ENST00000621870 TMCO5BA8MYB1 307 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 HSPD1P10809 573 aaKnown RBP10.47□□□□□ -0.73
GGA3-223ENST00000621870 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 RILPL1Q5EBL4 403 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 ZNF654Q8IZM8 581 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 INTS4Q96HW7 963 aaKnown RBP10.47□□□□□ -0.73
GGA3-223ENST00000621870 BLMP54132 1417 aaPredicted RBP10.47□□□□□ -0.73
GGA3-223ENST00000621870 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
GGA3-223ENST00000621870 ZNF853P0CG23 659 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 DALRD3Q5D0E6 543 aaKnown RBP10.47□□□□□ -0.73
GGA3-223ENST00000621870 TAF3Q5VWG9 929 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 CSRNP1Q96S65 589 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 IMPG2Q9BZV3 1241 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 DNAJC25Q9H1X3 360 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 TMX1Q9H3N1 280 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 KIF1BO60333 1816 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 URI1O94763 535 aaPredicted RBP10.47□□□□□ -0.73
GGA3-223ENST00000621870 ALAS1P13196 640 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 UBASH3AP57075 661 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 PTH1RQ03431 593 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 ICA1Q05084 483 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 PTPN14Q15678 1187 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 PNMA1Q8ND90 353 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 DSCC1Q9BVC3 393 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 ANTXR1Q9H6X2 564 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
GGA3-223ENST00000621870 JAK2O60674 1132 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 ADD1P35611 737 aaKnown RBP10.46□□□□□ -0.73
GGA3-223ENST00000621870 CCT6AP40227 531 aaKnown RBP10.46□□□□□ -0.73
GGA3-223ENST00000621870 ARID5AQ03989 594 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 PRPF4BQ13523 1007 aaKnown RBP10.46□□□□□ -0.73
GGA3-223ENST00000621870 CLEC4GQ6UXB4 293 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
GGA3-223ENST00000621870 ZSCAN12O43309 604 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 KIF5CO60282 957 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 CCNT1O60563 726 aaKnown RBP10.46□□□□□ -0.73
GGA3-223ENST00000621870 CTNNA2P26232 953 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 ANO6Q4KMQ2 910 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 SPICE1Q8N0Z3 855 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 FERMT2Q96AC1 680 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 NARFQ9UHQ1 456 aa10.46□□□□□ -0.73
GGA3-223ENST00000621870 TNKSO95271 1327 aa10.46□□□□□ -0.74
GGA3-223ENST00000621870 ADCY5O95622 1261 aa10.46□□□□□ -0.74
GGA3-223ENST00000621870 PTPN12Q05209 780 aaKnown RBP10.46□□□□□ -0.74
GGA3-223ENST00000621870 CC2D2BQ6DHV5 1058 aa10.46□□□□□ -0.74
GGA3-223ENST00000621870 TNS3Q68CZ2 1445 aa10.46□□□□□ -0.74
GGA3-223ENST00000621870 ANKRD62A6NC57 917 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 GSPT1P15170 499 aaKnown RBP10.45□□□□□ -0.74
GGA3-223ENST00000621870 NONOQ15233 471 aaKnown RBP eCLIP10.45□□□□□ -0.74
GGA3-223ENST00000621870 SPECC1Q5M775 1068 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 KRT40Q6A162 431 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 GADL1Q6ZQY3 521 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 TMC4Q7Z404 712 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 TAX1BP1Q86VP1 789 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 SYNCQ9H7C4 482 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 NPR1P16066 1061 aa10.45□□□□□ -0.74
GGA3-223ENST00000621870 ADCY7P51828 1080 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms