RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 KCNJ14Q9UNX9 436 aa12.28□□□□□ -0.44
CDH1-214ENST00000621016 MINDY4BA8MYZ0 360 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 NEBLO76041 1014 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 SERPINC1P01008 464 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 PLA2G4AP47712 749 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.44
CDH1-214ENST00000621016 HPS5Q9UPZ3 1129 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 RGPD5Q99666 1765 aa12.27□□□□□ -0.44
CDH1-214ENST00000621016 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 IFIT3O14879 490 aaKnown RBP12.27□□□□□ -0.45
CDH1-214ENST00000621016 STARD3NLO95772 234 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 MAGEB6Q8N7X4 407 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 ACSBG1Q96GR2 724 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDH1-214ENST00000621016 MTMR7Q9Y216 660 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 WDHD1O75717 1129 aaPredicted RBP12.27□□□□□ -0.45
CDH1-214ENST00000621016 PFKFB1P16118 471 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 CDC27P30260 824 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 TRIM29Q14134 588 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 BRINP3Q76B58 766 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
CDH1-214ENST00000621016 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 ZBTB1Q9Y2K1 713 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
CDH1-214ENST00000621016 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 ANKRD18BA2A2Z9 1011 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 ZNF827Q17R98 1081 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
CDH1-214ENST00000621016 CFAP100Q494V2 611 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 FMR1NBQ8N0W7 255 aaPredicted RBP12.26□□□□□ -0.45
CDH1-214ENST00000621016 ENGASEQ8NFI3 743 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 SMIM22K7EJ46 135 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 CTAGE5O15320 804 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 SYKP43405 635 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 KCNQ4P56696 695 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 ADALQ6DHV7 355 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 NAPBQ9H115 298 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 FOXN1O15353 648 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 MBD4O95243 580 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 PNMA6AP0CW24 399 aaPredicted RBP12.26□□□□□ -0.45
CDH1-214ENST00000621016 NOM1Q5C9Z4 860 aaKnown RBP12.26□□□□□ -0.45
CDH1-214ENST00000621016 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 KRT40Q6A162 431 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 MICALL1Q8N3F8 863 aa12.26□□□□□ -0.45
CDH1-214ENST00000621016 BIN2Q9UBW5 565 aaPredicted RBP12.26□□□□□ -0.45
CDH1-214ENST00000621016 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 WTIPA6NIX2 430 aaPredicted RBP12.25□□□□□ -0.45
CDH1-214ENST00000621016 IARSP41252 1262 aaKnown RBP12.25□□□□□ -0.45
CDH1-214ENST00000621016 CLCN6P51797 869 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 GPS2Q13227 327 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 TTLL11Q8NHH1 800 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 MPHOSPH8Q99549 860 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 WDR17Q8IZU2 1322 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 H0YHG0 523 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
CDH1-214ENST00000621016 SARNPP82979 210 aaKnown RBP12.25□□□□□ -0.45
CDH1-214ENST00000621016 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 RBM43Q6ZSC3 357 aaKnown RBP12.25□□□□□ -0.45
CDH1-214ENST00000621016 GRAMD1CQ8IYS0 662 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
CDH1-214ENST00000621016 ANGEL1Q9UNK9 670 aaKnown RBP12.25□□□□□ -0.45
CDH1-214ENST00000621016 ZBTB43O43298 467 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 COBLO75128 1261 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 PRDM1O75626 825 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 SFPQP23246 707 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDH1-214ENST00000621016 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 MB21D2Q8IYB1 491 aaPredicted RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 RAI14Q9P0K7 980 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 BTBD18B2RXH4 712 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 KIF23Q02241 960 aaPredicted RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 IRAK4Q9NWZ3 460 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 LRP2BPQ9P2M1 347 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 FHOD1Q9Y613 1164 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 EIF3CLB5ME19 914 aaKnown RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 PDE6AP16499 860 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 BCAMP50895 628 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 KLHL10Q6JEL2 608 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 EIF3CQ99613 913 aaKnown RBP12.24□□□□□ -0.45
CDH1-214ENST00000621016 NEDD4P46934 1319 aa12.24□□□□□ -0.45
CDH1-214ENST00000621016 CAND2O75155 1236 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 NLRP10Q86W26 655 aa12.23□□□□□ -0.45
CDH1-214ENST00000621016 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms