RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SLC4A8Q2Y0W8 1093 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 ERC1Q8IUD2 1116 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 SH3TC2Q8TF17 1288 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 FAM151AQ8WW52 585 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
UBXN1-218ENST00000616865 IL15P40933 162 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-218ENST00000616865 PRMT2P55345 433 aa18.2■□□□□ 0.5
UBXN1-218ENST00000616865 DIXDC1Q155Q3 683 aa18.2■□□□□ 0.5
UBXN1-218ENST00000616865 ATG9AQ7Z3C6 839 aa18.2■□□□□ 0.5
UBXN1-218ENST00000616865 ANKRD23Q86SG2 305 aa18.2■□□□□ 0.5
UBXN1-218ENST00000616865 ADGRA2Q96PE1 1338 aa18.2■□□□□ 0.5
UBXN1-218ENST00000616865 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 MYCP01106 439 aaPredicted RBP18.19■□□□□ 0.5
UBXN1-218ENST00000616865 PRDX5P30044 214 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 TCP10Q12799 353 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 CDC42EP5Q6NZY7 148 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 C17orf99Q6UX52 265 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 ZNF112Q9UJU3 913 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 KCNH4Q9UQ05 1017 aa18.19■□□□□ 0.5
UBXN1-218ENST00000616865 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
UBXN1-218ENST00000616865 NFIAQ12857 509 aa18.18■□□□□ 0.5
UBXN1-218ENST00000616865 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
UBXN1-218ENST00000616865 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
UBXN1-218ENST00000616865 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 PDHXO00330 501 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 IGHDP01880 384 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 CTGFP29279 349 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 DCTPP1Q9H773 170 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 FAM198AQ9UFP1 575 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 CPA4Q9UI42 421 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 MGAMO43451 1857 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 SALL1Q9NSC2 1324 aa18.17■□□□□ 0.5
UBXN1-218ENST00000616865 ECM2O94769 699 aaPredicted RBP18.16■□□□□ 0.5
UBXN1-218ENST00000616865 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
UBXN1-218ENST00000616865 MOGSQ13724 837 aa18.16■□□□□ 0.5
UBXN1-218ENST00000616865 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
UBXN1-218ENST00000616865 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
UBXN1-218ENST00000616865 DOCK1Q14185 1865 aa18.16■□□□□ 0.5
UBXN1-218ENST00000616865 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
UBXN1-218ENST00000616865 PTPRFP10586 1907 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 PSMC4P43686 418 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 FXR1P51114 621 aaKnown RBP eCLIP18.15■□□□□ 0.5
UBXN1-218ENST00000616865 TFCP2Q12800 502 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 TRIM47Q96LD4 638 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 LRRCC1Q9C099 1032 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 USP40Q9NVE5 1235 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 SRRDQ9UH36 339 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 RFX7Q2KHR2 1363 aa18.15■□□□□ 0.5
UBXN1-218ENST00000616865 SEMA3EO15041 775 aa18.14■□□□□ 0.49
UBXN1-218ENST00000616865 OSBPP22059 807 aa18.14■□□□□ 0.49
UBXN1-218ENST00000616865 RHPN1Q8TCX5 695 aa18.14■□□□□ 0.49
UBXN1-218ENST00000616865 SHISA4Q96DD7 197 aa18.14■□□□□ 0.49
UBXN1-218ENST00000616865 PARK7Q99497 189 aaKnown RBP18.14■□□□□ 0.49
UBXN1-218ENST00000616865 DENND2AQ9ULE3 1009 aa18.14■□□□□ 0.49
UBXN1-218ENST00000616865 MYPNQ86TC9 1320 aa18.14■□□□□ 0.49
UBXN1-218ENST00000616865 HOXD10P28358 340 aa18.13■□□□□ 0.49
UBXN1-218ENST00000616865 PHKA1P46020 1223 aa18.13■□□□□ 0.49
UBXN1-218ENST00000616865 MTFR1Q15390 333 aa18.13■□□□□ 0.49
UBXN1-218ENST00000616865 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
UBXN1-218ENST00000616865 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
UBXN1-218ENST00000616865 COLQQ9Y215 455 aaPredicted RBP18.13■□□□□ 0.49
UBXN1-218ENST00000616865 PHIPQ8WWQ0 1821 aa18.13■□□□□ 0.49
UBXN1-218ENST00000616865 ZBTB22O15209 634 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 FMNL1O95466 1100 aaPredicted RBP18.12■□□□□ 0.49
UBXN1-218ENST00000616865 GRK4P32298 578 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 GPAT2Q6NUI2 795 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 CLASRPQ8N2M8 674 aaKnown RBP18.12■□□□□ 0.49
UBXN1-218ENST00000616865 RAET1EQ8TD07 263 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 IDI2Q9BXS1 227 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 IL1RAPL2Q9NP60 686 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 GAKO14976 1311 aa18.12■□□□□ 0.49
UBXN1-218ENST00000616865 CXCL11O14625 94 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 ENTPD3O75355 529 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 BCRP11274 1271 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 RGS3P49796 1198 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 SMC5Q8IY18 1101 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 SCYL3Q8IZE3 742 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
UBXN1-218ENST00000616865 NEUROD6Q96NK8 337 aa18.11■□□□□ 0.49
UBXN1-218ENST00000616865 PDS5AQ29RF7 1337 aaKnown RBP18.1■□□□□ 0.49
UBXN1-218ENST00000616865 A0A0G2JLL6 359 aaPredicted RBP18.1■□□□□ 0.49
UBXN1-218ENST00000616865 PHF20L1A8MW92 1017 aa18.1■□□□□ 0.49
UBXN1-218ENST00000616865 H0YGN5 161 aa18.1■□□□□ 0.49
UBXN1-218ENST00000616865 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
UBXN1-218ENST00000616865 CYP2C8P10632 490 aa18.1■□□□□ 0.49
UBXN1-218ENST00000616865 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
UBXN1-218ENST00000616865 CCDC102BQ68D86 513 aa18.1■□□□□ 0.49
UBXN1-218ENST00000616865 PRRT2Q7Z6L0 340 aaPredicted RBP18.1■□□□□ 0.49
UBXN1-218ENST00000616865 IFIT2P09913 472 aaKnown RBP18.09■□□□□ 0.49
UBXN1-218ENST00000616865 ADORA1P30542 326 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 FCGRTP55899 365 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 PRKCZQ05513 592 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 RASGRF1Q13972 1273 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 TNNI3KQ59H18 835 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms