RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 CA12O43570 354 aa16.71■□□□□ 0.27
UPK1A-203ENST00000616789 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
UPK1A-203ENST00000616789 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
UPK1A-203ENST00000616789 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
UPK1A-203ENST00000616789 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
UPK1A-203ENST00000616789 MS4A4AQ96JQ5 239 aa16.71■□□□□ 0.27
UPK1A-203ENST00000616789 SAGE1Q9NXZ1 904 aa16.71■□□□□ 0.27
UPK1A-203ENST00000616789 AATFQ9NY61 560 aaKnown RBP eCLIP16.71■□□□□ 0.27
UPK1A-203ENST00000616789 SIPA1L1O43166 1804 aa16.71■□□□□ 0.27
UPK1A-203ENST00000616789 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
UPK1A-203ENST00000616789 CASP8AP2Q9UKL3 1982 aa16.7■□□□□ 0.26
UPK1A-203ENST00000616789 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
UPK1A-203ENST00000616789 TESPA1A2RU30 521 aaPredicted RBP16.7■□□□□ 0.26
UPK1A-203ENST00000616789 ELP3Q9H9T3 547 aa16.7■□□□□ 0.26
UPK1A-203ENST00000616789 SUPT16HQ9Y5B9 1047 aaKnown RBP16.7■□□□□ 0.26
UPK1A-203ENST00000616789 TRPA1O75762 1119 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 IDH1O75874 414 aaKnown RBP16.69■□□□□ 0.26
UPK1A-203ENST00000616789 INPP5BP32019 993 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
UPK1A-203ENST00000616789 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
UPK1A-203ENST00000616789 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 MAGEB6Q8N7X4 407 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 OPTNQ96CV9 577 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 HOOK2Q96ED9 719 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 HAUS7Q99871 368 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 PTPN18Q99952 460 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 BEGAINQ9BUH8 593 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 ZNF341Q9BYN7 854 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 BOLA2Q9H3K6 86 aa16.69■□□□□ 0.26
UPK1A-203ENST00000616789 SPDYE5A6NIY4 337 aa16.68■□□□□ 0.26
UPK1A-203ENST00000616789 TBC1D12O60347 775 aa16.68■□□□□ 0.26
UPK1A-203ENST00000616789 CYP7A1P22680 504 aa16.68■□□□□ 0.26
UPK1A-203ENST00000616789 PICALMQ13492 652 aa16.68■□□□□ 0.26
UPK1A-203ENST00000616789 TMED8Q6PL24 325 aaPredicted RBP16.68■□□□□ 0.26
UPK1A-203ENST00000616789 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
UPK1A-203ENST00000616789 CFHR5Q9BXR6 569 aa16.68■□□□□ 0.26
UPK1A-203ENST00000616789 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
UPK1A-203ENST00000616789 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
UPK1A-203ENST00000616789 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
UPK1A-203ENST00000616789 GOLIM4O00461 696 aa16.67■□□□□ 0.26
UPK1A-203ENST00000616789 CHGBP05060 677 aa16.67■□□□□ 0.26
UPK1A-203ENST00000616789 AAMPQ13685 434 aa16.67■□□□□ 0.26
UPK1A-203ENST00000616789 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
UPK1A-203ENST00000616789 NOL9Q5SY16 702 aaKnown RBP16.67■□□□□ 0.26
UPK1A-203ENST00000616789 TEX11Q8IYF3 940 aa16.67■□□□□ 0.26
UPK1A-203ENST00000616789 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
UPK1A-203ENST00000616789 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
UPK1A-203ENST00000616789 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
UPK1A-203ENST00000616789 BAG3O95817 575 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 PDE6AP16499 860 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 INHBEP58166 350 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
UPK1A-203ENST00000616789 SLFNL1Q499Z3 407 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
UPK1A-203ENST00000616789 IFNL1Q8IU54 200 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
UPK1A-203ENST00000616789 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 FLT1P17948 1338 aa16.66■□□□□ 0.26
UPK1A-203ENST00000616789 HTTP42858 3142 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 IRF6O14896 467 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 SREBF2Q12772 1141 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 ERO1BQ86YB8 467 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
UPK1A-203ENST00000616789 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 CSADQ9Y600 493 aa16.65■□□□□ 0.26
UPK1A-203ENST00000616789 IGHDP01880 384 aa16.64■□□□□ 0.26
UPK1A-203ENST00000616789 PLCG2P16885 1265 aa16.64■□□□□ 0.26
UPK1A-203ENST00000616789 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.26
UPK1A-203ENST00000616789 TSHZ3Q63HK5 1081 aa16.64■□□□□ 0.26
UPK1A-203ENST00000616789 PI4K2BQ8TCG2 481 aa16.64■□□□□ 0.26
UPK1A-203ENST00000616789 BRI3BPQ8WY22 251 aa16.64■□□□□ 0.26
UPK1A-203ENST00000616789 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.26
UPK1A-203ENST00000616789 MYH7P12883 1935 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 CENPFP49454 3210 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 FAM196BA6NMK8 535 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 ADD2P35612 726 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 MOGSQ13724 837 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 ZSCAN29Q8IWY8 852 aaPredicted RBP16.64■□□□□ 0.25
UPK1A-203ENST00000616789 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
UPK1A-203ENST00000616789 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
UPK1A-203ENST00000616789 MYH1P12882 1939 aa16.63■□□□□ 0.25
UPK1A-203ENST00000616789 PPATQ06203 517 aa16.63■□□□□ 0.25
UPK1A-203ENST00000616789 PPIL2Q13356 520 aa16.63■□□□□ 0.25
UPK1A-203ENST00000616789 NOM1Q5C9Z4 860 aaKnown RBP16.63■□□□□ 0.25
UPK1A-203ENST00000616789 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
UPK1A-203ENST00000616789 PALD1Q9ULE6 856 aa16.63■□□□□ 0.25
UPK1A-203ENST00000616789 KCNH4Q9UQ05 1017 aa16.63■□□□□ 0.25
UPK1A-203ENST00000616789 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
UPK1A-203ENST00000616789 JAG1P78504 1218 aa16.62■□□□□ 0.25
UPK1A-203ENST00000616789 CERS3Q8IU89 383 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms