RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 DOCK1Q14185 1865 aa25.7■■□□□ 1.7
TRAPPC3-208ENST00000616074 MROH7-TTC4A0A0A0MT08 1334 aa25.69■■□□□ 1.7
TRAPPC3-208ENST00000616074 ADGRA2Q96PE1 1338 aa25.69■■□□□ 1.7
TRAPPC3-208ENST00000616074 ECM2O94769 699 aaPredicted RBP25.69■■□□□ 1.7
TRAPPC3-208ENST00000616074 GNAI2P04899 355 aa25.69■■□□□ 1.7
TRAPPC3-208ENST00000616074 CLUAP1Q96AJ1 413 aa25.69■■□□□ 1.7
TRAPPC3-208ENST00000616074 TMEM106CQ9BVX2 250 aa25.69■■□□□ 1.7
TRAPPC3-208ENST00000616074 PNMA6EA0A0J9YXQ4 647 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 DDTLA6NHG4 134 aaPredicted RBP25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 SLURP2P0DP57 97 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 CTGFP29279 349 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 MECOMQ03112 1051 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 PICALMQ13492 652 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 ERICH6Q7L0X2 663 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 ZSCAN29Q8IWY8 852 aaPredicted RBP25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 SCYL3Q8IZE3 742 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 ZNF384Q8TF68 577 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 HMG20BQ9P0W2 317 aa25.68■■□□□ 1.7
TRAPPC3-208ENST00000616074 PHIPQ8WWQ0 1821 aa25.67■■□□□ 1.7
TRAPPC3-208ENST00000616074 PTPRFP10586 1907 aa25.67■■□□□ 1.7
TRAPPC3-208ENST00000616074 GNRH1P01148 92 aa25.67■■□□□ 1.7
TRAPPC3-208ENST00000616074 PI16Q6UXB8 463 aa25.67■■□□□ 1.7
TRAPPC3-208ENST00000616074 SH3TC2Q8TF17 1288 aa25.67■■□□□ 1.7
TRAPPC3-208ENST00000616074 CXCL11O14625 94 aa25.66■■□□□ 1.7
TRAPPC3-208ENST00000616074 GPAT2Q6NUI2 795 aa25.66■■□□□ 1.7
TRAPPC3-208ENST00000616074 GPR75-ASB3A0A0A6YYF3 556 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 MYCP01106 439 aaPredicted RBP25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 PTPRAP18433 802 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 RHBDL3P58872 404 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 MAP3K10Q02779 954 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 SPATA5Q8NB90 893 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 PICK1Q9NRD5 415 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 ZHX2Q9Y6X8 837 aa25.65■■□□□ 1.7
TRAPPC3-208ENST00000616074 MGAMO43451 1857 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 ARID4AP29374 1257 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 PSMC4P43686 418 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 PRMT2P55345 433 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 G3BP1Q13283 466 aaKnown RBP eCLIP25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 SLC4A8Q2Y0W8 1093 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 GORABQ5T7V8 394 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 TBC1D9Q6ZT07 1266 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 TRIM47Q96LD4 638 aa25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 PARK7Q99497 189 aaKnown RBP25.64■■□□□ 1.7
TRAPPC3-208ENST00000616074 A0A0G2JLL6 359 aaPredicted RBP25.63■■□□□ 1.69
TRAPPC3-208ENST00000616074 CYP2C8P10632 490 aa25.63■■□□□ 1.69
TRAPPC3-208ENST00000616074 PRRT2Q7Z6L0 340 aaPredicted RBP25.63■■□□□ 1.69
TRAPPC3-208ENST00000616074 TMEM57Q8N5G2 664 aa25.63■■□□□ 1.69
TRAPPC3-208ENST00000616074 NSUN4Q96CB9 384 aaKnown RBP25.63■■□□□ 1.69
TRAPPC3-208ENST00000616074 SRRDQ9UH36 339 aa25.62■■□□□ 1.69
TRAPPC3-208ENST00000616074 AFG3L2Q9Y4W6 797 aa25.62■■□□□ 1.69
TRAPPC3-208ENST00000616074 BCRP11274 1271 aa25.61■■□□□ 1.69
TRAPPC3-208ENST00000616074 OSBPP22059 807 aa25.61■■□□□ 1.69
TRAPPC3-208ENST00000616074 MCAMP43121 646 aa25.61■■□□□ 1.69
TRAPPC3-208ENST00000616074 ZKSCAN2Q63HK3 967 aa25.61■■□□□ 1.69
TRAPPC3-208ENST00000616074 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.61■■□□□ 1.69
TRAPPC3-208ENST00000616074 MAST2Q6P0Q8 1798 aa25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 CTNND1O60716 968 aaKnown RBP25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 FMNL1O95466 1100 aaPredicted RBP25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 GSTO1P78417 241 aa25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 FASTKD5Q7L8L6 764 aaKnown RBP25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 RAI14Q9P0K7 980 aa25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 ATAD5Q96QE3 1844 aa25.6■■□□□ 1.69
TRAPPC3-208ENST00000616074 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
TRAPPC3-208ENST00000616074 LDHCP07864 332 aa25.59■■□□□ 1.69
TRAPPC3-208ENST00000616074 GADL1Q6ZQY3 521 aa25.59■■□□□ 1.69
TRAPPC3-208ENST00000616074 CCDC84Q86UT8 332 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC3-208ENST00000616074 MYPNQ86TC9 1320 aa25.59■■□□□ 1.69
TRAPPC3-208ENST00000616074 FAM196BA6NMK8 535 aa25.58■■□□□ 1.69
TRAPPC3-208ENST00000616074 TBC1D12O60347 775 aa25.58■■□□□ 1.69
TRAPPC3-208ENST00000616074 UQCRFS1P1P0C7P4 283 aa25.58■■□□□ 1.69
TRAPPC3-208ENST00000616074 HOXD10P28358 340 aa25.58■■□□□ 1.69
TRAPPC3-208ENST00000616074 POLA2Q14181 598 aa25.58■■□□□ 1.69
TRAPPC3-208ENST00000616074 COL2A1P02458 1487 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC3-208ENST00000616074 TRIM75PA6NK02 468 aa25.57■■□□□ 1.68
TRAPPC3-208ENST00000616074 MTFR1Q15390 333 aa25.57■■□□□ 1.68
TRAPPC3-208ENST00000616074 RAET1EQ8TD07 263 aa25.57■■□□□ 1.68
TRAPPC3-208ENST00000616074 GCC1Q96CN9 775 aa25.57■■□□□ 1.68
TRAPPC3-208ENST00000616074 MYO5AQ9Y4I1 1855 aaKnown RBP25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 TNNI3KQ59H18 835 aa25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 OSBPL5Q9H0X9 879 aaPredicted RBP25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 LRP2BPQ9P2M1 347 aa25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 SLC45A1Q9Y2W3 748 aa25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 FPGT-TNNI3KV9GXZ4 949 aa25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 SIPA1L1O43166 1804 aa25.56■■□□□ 1.68
TRAPPC3-208ENST00000616074 CDK5RAP2Q96SN8 1893 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 GRK4P32298 578 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 FCGRTP55899 365 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 PRKCZQ05513 592 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 SSH3Q8TE77 659 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 C1orf115Q9H7X2 142 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 GPR108Q9NPR9 543 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 SNRKQ9NRH2 765 aa25.55■■□□□ 1.68
TRAPPC3-208ENST00000616074 LOC285556D6RIA3 1793 aa25.54■■□□□ 1.68
TRAPPC3-208ENST00000616074 ATP8B2P98198 1209 aa25.54■■□□□ 1.68
TRAPPC3-208ENST00000616074 TTC39AQ5SRH9 613 aa25.54■■□□□ 1.68
TRAPPC3-208ENST00000616074 TEX11Q8IYF3 940 aa25.54■■□□□ 1.68
TRAPPC3-208ENST00000616074 DBNDD2Q9BQY9 259 aa25.54■■□□□ 1.68
TRAPPC3-208ENST00000616074 HNRNPUQ00839 825 aaKnown RBP eCLIP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms