RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 MRIQ9BWK5 157 aa10.9□□□□□ -0.66
MMP28-205ENST00000615317 LSG1Q9H089 658 aaKnown RBP10.9□□□□□ -0.66
MMP28-205ENST00000615317 SAP30BPQ9UHR5 308 aaKnown RBP10.9□□□□□ -0.66
MMP28-205ENST00000615317 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.67
MMP28-205ENST00000615317 GSG1L2A8MUP6 293 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 ADM5C9JUS6 153 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 SEC24BO95487 1268 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 HSPD1P10809 573 aaKnown RBP10.89□□□□□ -0.67
MMP28-205ENST00000615317 EVX2Q03828 476 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 USP50Q70EL3 339 aaPredicted RBP10.89□□□□□ -0.67
MMP28-205ENST00000615317 APOBEC3FQ8IUX4 373 aaKnown RBP10.89□□□□□ -0.67
MMP28-205ENST00000615317 CDAN1Q8IWY9 1227 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 OSBPL5Q9H0X9 879 aaPredicted RBP10.89□□□□□ -0.67
MMP28-205ENST00000615317 NAPBQ9H115 298 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
MMP28-205ENST00000615317 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
MMP28-205ENST00000615317 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
MMP28-205ENST00000615317 ZMYM6O95789 1325 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 CYP2D7A0A087X1C5 515 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 REC8O95072 547 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 CYP2D6P10635 497 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 YY1P25490 414 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 IFNL3Q8IZI9 196 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 DSCC1Q9BVC3 393 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 IDI2Q9BXS1 227 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 TMEM39BQ9GZU3 492 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 MCM9Q9NXL9 1143 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 ARPP21Q9UBL0 812 aaPredicted RBP10.88□□□□□ -0.67
MMP28-205ENST00000615317 RBM8AQ9Y5S9 174 aaKnown RBP10.88□□□□□ -0.67
MMP28-205ENST00000615317 ATRNL1Q5VV63 1379 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 ROBO3Q96MS0 1386 aa10.88□□□□□ -0.67
MMP28-205ENST00000615317 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 SMIM22K7EJ46 135 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 VEGFAP15692 232 aaPredicted RBP10.87□□□□□ -0.67
MMP28-205ENST00000615317 TNNI2P48788 182 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 HAND2P61296 217 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
MMP28-205ENST00000615317 ZSCAN29Q8IWY8 852 aaPredicted RBP10.87□□□□□ -0.67
MMP28-205ENST00000615317 ZFPM1Q8IX07 1006 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 NACAP1Q9BZK3 213 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
MMP28-205ENST00000615317 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 PATL2C9JE40 543 aaKnown RBP10.86□□□□□ -0.67
MMP28-205ENST00000615317 ENTPD3O75355 529 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 RASA3Q14644 834 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 MAP1SQ66K74 1059 aaPredicted RBP10.86□□□□□ -0.67
MMP28-205ENST00000615317 SH3BP5LQ7L8J4 393 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 KRT26Q7Z3Y9 468 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 LDHDQ86WU2 507 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 SULF1Q8IWU6 871 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 AMOTL1Q8IY63 956 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 STK11IPQ8N1F8 1099 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 DCPSQ96C86 337 aaKnown RBP10.86□□□□□ -0.67
MMP28-205ENST00000615317 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 GLIS2Q9BZE0 524 aaPredicted RBP10.86□□□□□ -0.67
MMP28-205ENST00000615317 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
MMP28-205ENST00000615317 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
MMP28-205ENST00000615317 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
MMP28-205ENST00000615317 DDTLA6NHG4 134 aaPredicted RBP10.85□□□□□ -0.67
MMP28-205ENST00000615317 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 USP17L12C9JPN9 530 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 USP17L21D6R901 530 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 FGAP02671 866 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 POLR3DP05423 398 aaPredicted RBP10.85□□□□□ -0.67
MMP28-205ENST00000615317 HLA-DOAP06340 250 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 SLURP2P0DP57 97 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 PPARAQ07869 468 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 FKBP1CQ5VVH2 108 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 DLK2Q6UY11 383 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 FAM83AQ86UY5 434 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 TBC1D10CQ8IV04 446 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 FAM151AQ8WW52 585 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 CSRNP1Q96S65 589 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 NBPF3Q9H094 633 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 TAF6LQ9Y6J9 622 aa10.85□□□□□ -0.67
MMP28-205ENST00000615317 NEDD4P46934 1319 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 PHIPQ8WWQ0 1821 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 KIF3CO14782 793 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 SLC27A2O14975 620 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
MMP28-205ENST00000615317 CYP21A2P08686 494 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 MCCP23508 829 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 PLCD1P51178 756 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 IMMTQ16891 758 aaKnown RBP10.84□□□□□ -0.67
MMP28-205ENST00000615317 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 GIMAP6Q6P9H5 292 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 SLC44A5Q8NCS7 719 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
MMP28-205ENST00000615317 MAP4K1Q92918 833 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 DYNLL2Q96FJ2 89 aa10.84□□□□□ -0.67
MMP28-205ENST00000615317 TEPSINQ96N21 525 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms