RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 DLGAP5Q15398 846 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 ZNF274Q96GC6 653 aaPredicted RBP16.62■□□□□ 0.25
SNPH-203ENST00000614659 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
SNPH-203ENST00000614659 A1BGP04217 495 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 SIK1P57059 783 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 NLRP12P59046 1061 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 ASIC1P78348 528 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
SNPH-203ENST00000614659 CPA1P15085 419 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 PLCD1P51178 756 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
SNPH-203ENST00000614659 BIN2Q9UBW5 565 aaPredicted RBP16.61■□□□□ 0.25
SNPH-203ENST00000614659 PNMA2Q9UL42 364 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 IVNS1ABPQ9Y6Y0 642 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 KIF4AO95239 1232 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 MLKLQ8NB16 471 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
SNPH-203ENST00000614659 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 HSF2BPO75031 334 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 DTHD1Q6ZMT9 781 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 IVLP07476 585 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 RPS8P62241 208 aaKnown RBP16.61■□□□□ 0.25
SNPH-203ENST00000614659 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
SNPH-203ENST00000614659 GPAA1O43292 621 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 RNF187Q5TA31 235 aaPredicted RBP16.6■□□□□ 0.25
SNPH-203ENST00000614659 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 FERMT2Q96AC1 680 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 RNF17Q9BXT8 1623 aaKnown RBP16.6■□□□□ 0.25
SNPH-203ENST00000614659 CHST3Q7LGC8 479 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 SELENOOQ9BVL4 669 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 LMAN1P49257 510 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 TICAM2Q86XR7 235 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 CBX8Q9HC52 389 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 GOLGA6L10A0A0M3HER8 536 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
SNPH-203ENST00000614659 IL6STP40189 918 aaPredicted RBP16.6■□□□□ 0.25
SNPH-203ENST00000614659 PABPC4Q13310 644 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNPH-203ENST00000614659 PLVAPQ9BX97 442 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 OGFRQ9NZT2 677 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 CCDC129Q6ZRS4 1044 aa16.6■□□□□ 0.25
SNPH-203ENST00000614659 ERCC6L2Q5T890 1561 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 CCDC91Q7Z6B0 441 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 SEPT12Q8IYM1 358 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 OPA1O60313 960 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
SNPH-203ENST00000614659 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 KCNH3Q9ULD8 1083 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 KIF5AQ12840 1032 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 STK24Q9Y6E0 443 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 SYCP3Q8IZU3 236 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 BAG1Q99933 345 aaPredicted RBP16.59■□□□□ 0.25
SNPH-203ENST00000614659 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 SPATA31A3Q5VYP0 1347 aa16.59■□□□□ 0.25
SNPH-203ENST00000614659 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.25
SNPH-203ENST00000614659 GLI2P10070 1586 aa16.58■□□□□ 0.25
SNPH-203ENST00000614659 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.25
SNPH-203ENST00000614659 JCADQ9P266 1359 aa16.58■□□□□ 0.25
SNPH-203ENST00000614659 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 TIMM10P62072 90 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 KIF22Q14807 665 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
SNPH-203ENST00000614659 PFKFB2O60825 505 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.24
SNPH-203ENST00000614659 ARHGAP27Q6ZUM4 889 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 HAUS7Q99871 368 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 ABCA9Q8IUA7 1624 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 TMCO5BA8MYB1 307 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 MYRIPQ8NFW9 859 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 TTF2Q9UNY4 1162 aaKnown RBP16.58■□□□□ 0.24
SNPH-203ENST00000614659 CSADQ9Y600 493 aa16.58■□□□□ 0.24
SNPH-203ENST00000614659 DKC1O60832 514 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNPH-203ENST00000614659 TRIM37O94972 964 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 CCDC174Q6PII3 467 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 CFAP65Q6ZU64 1925 aaKnown RBP16.57■□□□□ 0.24
SNPH-203ENST00000614659 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 GPATCH11Q8N954 259 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 SPAG5Q96R06 1193 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 SSR1P43307 286 aaKnown RBP16.57■□□□□ 0.24
SNPH-203ENST00000614659 UBXN1Q04323 297 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 ADGRB3O60242 1522 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 ZNF500O60304 480 aaPredicted RBP16.57■□□□□ 0.24
SNPH-203ENST00000614659 NOP2P46087 812 aaKnown RBP16.57■□□□□ 0.24
SNPH-203ENST00000614659 HLTFQ14527 1009 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNPH-203ENST00000614659 SLC4A8Q2Y0W8 1093 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms