RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 EPB41P11171 864 aaKnown RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SF3A3Q12874 501 aaKnown RBP eCLIP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SNCBQ16143 134 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 CAPN7Q9Y6W3 813 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SPDYE2BA6NHP3 402 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SPDYE6P0CI01 402 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 HARSP12081 509 aaKnown RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 KRT82Q9NSB4 513 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 TSTA3Q13630 321 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 EP400NLQ6ZTU2 488 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 ZFXP17010 805 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 KCNA4P22459 653 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 KRT71Q3SY84 523 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 VWA3BQ502W6 1294 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 IFIT1BQ5T764 474 aaKnown RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 CFAP61Q8NHU2 1237 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SLMAPQ14BN4 828 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 RPL13P26373 211 aaKnown RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 C16orf71Q8IYS4 520 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 RGS16O15492 202 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SART1O43290 800 aaKnown RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 RPAP2Q8IXW5 612 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-206ENST00000613296 PLEKHH2Q8IVE3 1493 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 SMTNP53814 917 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 KRT23Q9C075 422 aa9.3□□□□□ -0.92
ALMS1-206ENST00000613296 CLCN1P35523 988 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 PALM2Q8IXS6 379 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 ZNF622Q969S3 477 aaKnown RBP eCLIP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 RTL9Q8NET4 1388 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 CCDC159P0C7I6 412 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 PHBP35232 272 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 RTN1Q16799 776 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 GJC2Q5T442 439 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 RMDN2Q96LZ7 410 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 FAM170AA1A519 330 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 ZSCAN22P10073 491 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 HDAC11Q96DB2 347 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 GABPB1Q06547 395 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 DHX58Q96C10 678 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 TMOD3Q9NYL9 352 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 SYNRGQ9UMZ2 1314 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 TYRO3Q06418 890 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 GRAMD4Q6IC98 578 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 PIP4K2CQ8TBX8 421 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 AKR1B15C9JRZ8 316 aaPredicted RBP9.29□□□□□ -0.92
ALMS1-206ENST00000613296 TRAF1Q13077 416 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 FLOT2Q14254 428 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 GSTA4O15217 222 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 CLTAP09496 248 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 YY1AP1Q9H869 796 aa9.29□□□□□ -0.92
ALMS1-206ENST00000613296 SPDYE16A6NNV3 312 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-206ENST00000613296 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 CTAGE3PQ8IX95 158 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 TBC1D2Q9BYX2 928 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 ZSCAN32Q9NX65 697 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 IFNKQ9P0W0 207 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 ELP1O95163 1332 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 POLR3CQ9BUI4 534 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-206ENST00000613296 GNGT2O14610 69 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 BACH1O14867 736 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 TRIM75PA6NK02 468 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 S100BP04271 92 aaPredicted RBP9.28□□□□□ -0.92
ALMS1-206ENST00000613296 NEK2P51955 445 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 SP4Q02446 784 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 CENPKQ9BS16 269 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 H0YC42 278 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 TNNI2P48788 182 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 DCUN1D2Q6PH85 259 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 ZKSCAN3Q9BRR0 538 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 MKL2Q9ULH7 1088 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 CEP104O60308 925 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 TBCCQ15814 346 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 ARMC9Q7Z3E5 817 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 SCYL1Q96KG9 808 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 CCDC138Q96M89 665 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 FNBP1Q96RU3 617 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 FAM8A1Q9UBU6 413 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 ZKSCAN5Q9Y2L8 839 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 NKTRP30414 1462 aaKnown RBP9.28□□□□□ -0.92
ALMS1-206ENST00000613296 TRPA1O75762 1119 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 CYP26C1Q6V0L0 522 aa9.28□□□□□ -0.92
ALMS1-206ENST00000613296 HLA-DPA1P20036 260 aa9.27□□□□□ -0.92
ALMS1-206ENST00000613296 ARHGAP44Q17R89 818 aa9.27□□□□□ -0.92
ALMS1-206ENST00000613296 FBXO41Q8TF61 875 aa9.27□□□□□ -0.92
ALMS1-206ENST00000613296 FGD4Q96M96 766 aa9.27□□□□□ -0.92
ALMS1-206ENST00000613296 ALG1Q9BT22 464 aa9.27□□□□□ -0.92
ALMS1-206ENST00000613296 TRMT112Q9UI30 125 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms