RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 BRCA1P38398 1863 aaKnown RBP26.72■■□□□ 1.87
COMMD7-204ENST00000610160 USP5P45974 858 aa26.72■■□□□ 1.87
COMMD7-204ENST00000610160 SBK1Q52WX2 424 aa26.72■■□□□ 1.87
COMMD7-204ENST00000610160 RTKN2Q8IZC4 609 aa26.72■■□□□ 1.87
COMMD7-204ENST00000610160 TOMM22Q9NS69 142 aa26.72■■□□□ 1.87
COMMD7-204ENST00000610160 DDX60LQ5H9U9 1706 aaKnown RBP26.72■■□□□ 1.87
COMMD7-204ENST00000610160 SMIM22K7EJ46 135 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 PCP11498 1178 aaKnown RBP26.71■■□□□ 1.87
COMMD7-204ENST00000610160 PLCG2P16885 1265 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 RRP12Q5JTH9 1297 aaKnown RBP26.71■■□□□ 1.87
COMMD7-204ENST00000610160 ZSWIM5Q9P217 1185 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 FOCADQ5VW36 1801 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 STK11IPQ8N1F8 1099 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 PSMD1Q99460 953 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 MXD3Q9BW11 206 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 BRPF3Q9ULD4 1205 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 NAP1L2Q9ULW6 460 aaPredicted RBP26.71■■□□□ 1.87
COMMD7-204ENST00000610160 DAGLAQ9Y4D2 1042 aa26.71■■□□□ 1.87
COMMD7-204ENST00000610160 WDR33Q9C0J8 1336 aaKnown RBP26.71■■□□□ 1.87
COMMD7-204ENST00000610160 KLF18A0A0U1RQI7 1052 aa26.7■■□□□ 1.86
COMMD7-204ENST00000610160 STRIP1Q5VSL9 837 aa26.7■■□□□ 1.86
COMMD7-204ENST00000610160 MCM9Q9NXL9 1143 aa26.7■■□□□ 1.86
COMMD7-204ENST00000610160 TTF2Q9UNY4 1162 aaKnown RBP26.7■■□□□ 1.86
COMMD7-204ENST00000610160 DTNBO60941 627 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 FGRP09769 529 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 SYT1P21579 422 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 FKBP1AP62942 108 aaKnown RBP26.69■■□□□ 1.86
COMMD7-204ENST00000610160 IGDCC4Q8TDY8 1250 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 LLPHQ9BRT6 129 aaKnown RBP26.69■■□□□ 1.86
COMMD7-204ENST00000610160 KCNQ5Q9NR82 932 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 F8W031 263 aaPredicted RBP26.69■■□□□ 1.86
COMMD7-204ENST00000610160 PPIP5K2O43314 1243 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 ESR2Q92731 530 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 MTA3Q9BTC8 594 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 ADAMTSL1Q8N6G6 1762 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 PSME4Q14997 1843 aa26.69■■□□□ 1.86
COMMD7-204ENST00000610160 GOLGA8BA8MQT2 603 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 STX6O43752 255 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 RHBDL3P58872 404 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 TGFBRAP1Q8WUH2 860 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 CHMP4CQ96CF2 233 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 SGIP1Q9BQI5 828 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 PIM2Q9P1W9 311 aa26.68■■□□□ 1.86
COMMD7-204ENST00000610160 DDX11L8A8MPP1 907 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 CYP2D6P10635 497 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 CCT2P78371 535 aaKnown RBP26.67■■□□□ 1.86
COMMD7-204ENST00000610160 TMEM67Q5HYA8 995 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 DACT2Q5SW24 774 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 LY9Q9HBG7 655 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 BAG4O95429 457 aaKnown RBP26.67■■□□□ 1.86
COMMD7-204ENST00000610160 SLC3A2P08195 630 aaKnown RBP26.67■■□□□ 1.86
COMMD7-204ENST00000610160 USP17L8P0C7I0 530 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 SART3Q15020 963 aaKnown RBP26.67■■□□□ 1.86
COMMD7-204ENST00000610160 SOGA3Q5TF21 947 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 SGMS1Q86VZ5 419 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 TEX11Q8IYF3 940 aa26.67■■□□□ 1.86
COMMD7-204ENST00000610160 NCOA5Q9HCD5 579 aaKnown RBP26.67■■□□□ 1.86
COMMD7-204ENST00000610160 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.67■■□□□ 1.86
COMMD7-204ENST00000610160 USP17L3A6NCW0 530 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 USP17L4A6NCW7 530 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 IFIT3O14879 490 aaKnown RBP26.66■■□□□ 1.86
COMMD7-204ENST00000610160 JAK2O60674 1132 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 LIFRP42702 1097 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 EVX2Q03828 476 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 FOXD4L5Q5VV16 416 aaPredicted RBP26.66■■□□□ 1.86
COMMD7-204ENST00000610160 USP17L1Q7RTZ2 530 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 SMARCC2Q8TAQ2 1214 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 FOXD4L4Q8WXT5 416 aaPredicted RBP26.66■■□□□ 1.86
COMMD7-204ENST00000610160 HPS5Q9UPZ3 1129 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 ROBO3Q96MS0 1386 aa26.66■■□□□ 1.86
COMMD7-204ENST00000610160 NSUN7Q8NE18 718 aaKnown RBP26.66■■□□□ 1.86
COMMD7-204ENST00000610160 GOLGB1Q14789 3259 aaKnown RBP26.65■■□□□ 1.86
COMMD7-204ENST00000610160 PSDA5PKW4 1024 aaPredicted RBP26.65■■□□□ 1.86
COMMD7-204ENST00000610160 ORC4O43929 436 aa26.65■■□□□ 1.86
COMMD7-204ENST00000610160 PDCP20941 246 aa26.65■■□□□ 1.86
COMMD7-204ENST00000610160 C12orf60Q5U649 245 aa26.65■■□□□ 1.86
COMMD7-204ENST00000610160 MAPKAPK5Q8IW41 473 aa26.65■■□□□ 1.86
COMMD7-204ENST00000610160 AMOTL1Q8IY63 956 aa26.65■■□□□ 1.86
COMMD7-204ENST00000610160 CTDNEP1O95476 244 aa26.64■■□□□ 1.86
COMMD7-204ENST00000610160 PDIA4P13667 645 aaKnown RBP26.64■■□□□ 1.86
COMMD7-204ENST00000610160 SENP2Q9HC62 589 aa26.64■■□□□ 1.86
COMMD7-204ENST00000610160 MYH1P12882 1939 aa26.64■■□□□ 1.85
COMMD7-204ENST00000610160 FLT1P17948 1338 aa26.64■■□□□ 1.85
COMMD7-204ENST00000610160 ZSCAN22P10073 491 aaPredicted RBP26.64■■□□□ 1.85
COMMD7-204ENST00000610160 SCNN1DP51172 638 aa26.64■■□□□ 1.85
COMMD7-204ENST00000610160 APOA5Q6Q788 366 aa26.64■■□□□ 1.85
COMMD7-204ENST00000610160 HHIPL2Q6UWX4 724 aa26.64■■□□□ 1.85
COMMD7-204ENST00000610160 TEKT1Q969V4 418 aa26.64■■□□□ 1.85
COMMD7-204ENST00000610160 PRDM1O75626 825 aa26.63■■□□□ 1.85
COMMD7-204ENST00000610160 PDE4BQ07343 736 aa26.63■■□□□ 1.85
COMMD7-204ENST00000610160 LARP1BQ659C4 914 aaKnown RBP26.63■■□□□ 1.85
COMMD7-204ENST00000610160 ZKSCAN3Q9BRR0 538 aa26.63■■□□□ 1.85
COMMD7-204ENST00000610160 UBAC1Q9BSL1 405 aa26.63■■□□□ 1.85
COMMD7-204ENST00000610160 ECM29Q5VYK3 1845 aa26.62■■□□□ 1.85
COMMD7-204ENST00000610160 ERICH2A1L162 156 aa26.62■■□□□ 1.85
COMMD7-204ENST00000610160 PTPDC1A2A3K4 754 aa26.62■■□□□ 1.85
COMMD7-204ENST00000610160 YDJCA8MPS7 323 aa26.62■■□□□ 1.85
COMMD7-204ENST00000610160 HMGN5P82970 282 aaKnown RBP26.62■■□□□ 1.85
COMMD7-204ENST00000610160 DALRD3Q5D0E6 543 aaKnown RBP26.62■■□□□ 1.85
COMMD7-204ENST00000610160 NFXL1Q6ZNB6 911 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms