RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 IDI2Q9BXS1 227 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 MYH1P12882 1939 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 GPR75-ASB3A0A0A6YYF3 556 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
LINC00539-204ENST00000608957 INPP5BP32019 993 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 ZAP70P43403 619 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 RGS3P49796 1198 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 WRNIP1Q96S55 665 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 CFHR5Q9BXR6 569 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 ZSWIM8A7E2V4 1837 aa14.12□□□□□ -0.15
LINC00539-204ENST00000608957 DGKZQ13574 1117 aa14.11□□□□□ -0.15
LINC00539-204ENST00000608957 ZNF296Q8WUU4 475 aaPredicted RBP14.11□□□□□ -0.15
LINC00539-204ENST00000608957 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
LINC00539-204ENST00000608957 PIH1D3Q9NQM4 214 aaKnown RBP14.11□□□□□ -0.15
LINC00539-204ENST00000608957 ZNF112Q9UJU3 913 aa14.11□□□□□ -0.15
LINC00539-204ENST00000608957 NDUFB9Q9Y6M9 179 aa14.11□□□□□ -0.15
LINC00539-204ENST00000608957 MYH7P12883 1935 aa14.11□□□□□ -0.15
LINC00539-204ENST00000608957 DDTLA6NHG4 134 aaPredicted RBP14.1□□□□□ -0.15
LINC00539-204ENST00000608957 SPDYE5A6NIY4 337 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 GPR25O00155 361 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 ENTPD3O75355 529 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 CCDC158Q5M9N0 1113 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
LINC00539-204ENST00000608957 RHPN1Q8TCX5 695 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 BRI3BPQ8WY22 251 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 ZNF341Q9BYN7 854 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 IL1RAPL2Q9NP60 686 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 RAI14Q9P0K7 980 aa14.1□□□□□ -0.15
LINC00539-204ENST00000608957 INHBEP58166 350 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 PICALMQ13492 652 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 AACSQ86V21 672 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 SLF2Q8IX21 1173 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 LRP2BPQ9P2M1 347 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 CSADQ9Y600 493 aa14.09□□□□□ -0.15
LINC00539-204ENST00000608957 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 APBB1O00213 710 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 CAP1Q01518 475 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 MAP3K10Q02779 954 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 NOM1Q5C9Z4 860 aaKnown RBP14.08□□□□□ -0.16
LINC00539-204ENST00000608957 ERO1BQ86YB8 467 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 ERC1Q8IUD2 1116 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 HOOK2Q96ED9 719 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 ANTXR1Q9H6X2 564 aa14.08□□□□□ -0.16
LINC00539-204ENST00000608957 DDX60LQ5H9U9 1706 aaKnown RBP14.07□□□□□ -0.16
LINC00539-204ENST00000608957 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
LINC00539-204ENST00000608957 IRF6O14896 467 aa14.07□□□□□ -0.16
LINC00539-204ENST00000608957 LDHCP07864 332 aa14.07□□□□□ -0.16
LINC00539-204ENST00000608957 GSTO1P78417 241 aa14.07□□□□□ -0.16
LINC00539-204ENST00000608957 CRHR2Q13324 411 aa14.07□□□□□ -0.16
LINC00539-204ENST00000608957 NOL9Q5SY16 702 aaKnown RBP14.07□□□□□ -0.16
LINC00539-204ENST00000608957 CTU1Q7Z7A3 348 aaKnown RBP14.07□□□□□ -0.16
LINC00539-204ENST00000608957 SH3RF3Q8TEJ3 882 aaPredicted RBP14.07□□□□□ -0.16
LINC00539-204ENST00000608957 CCL15-CCL14A0A0B4J2E2 113 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 HMMRO75330 724 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
LINC00539-204ENST00000608957 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 PPIL2Q13356 520 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 CCL15Q16663 113 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 HSP90AB4PQ58FF6 505 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
LINC00539-204ENST00000608957 SMC5Q8IY18 1101 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 FAM43AQ8N2R8 423 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 KIF1BPQ96EK5 621 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 OSBPL5Q9H0X9 879 aaPredicted RBP14.06□□□□□ -0.16
LINC00539-204ENST00000608957 AATFQ9NY61 560 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC00539-204ENST00000608957 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.06□□□□□ -0.16
LINC00539-204ENST00000608957 NAV1Q8NEY1 1877 aa14.06□□□□□ -0.16
LINC00539-204ENST00000608957 FAM196BA6NMK8 535 aa14.05□□□□□ -0.16
LINC00539-204ENST00000608957 FKTNO75072 461 aa14.05□□□□□ -0.16
LINC00539-204ENST00000608957 GTF2A2P52657 109 aa14.05□□□□□ -0.16
LINC00539-204ENST00000608957 PPP4CP60510 307 aa14.05□□□□□ -0.16
LINC00539-204ENST00000608957 DYNLL1P63167 89 aaKnown RBP14.05□□□□□ -0.16
LINC00539-204ENST00000608957 MOGSQ13724 837 aa14.05□□□□□ -0.16
LINC00539-204ENST00000608957 ZSCAN29Q8IWY8 852 aaPredicted RBP14.05□□□□□ -0.16
LINC00539-204ENST00000608957 TEX11Q8IYF3 940 aa14.05□□□□□ -0.16
LINC00539-204ENST00000608957 MGAMO43451 1857 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 CCDC85CA6NKD9 419 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 BTBD19C9JJ37 291 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 RAB11FIP3O75154 756 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 PPATQ06203 517 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 RRP1BQ14684 758 aaKnown RBP14.04□□□□□ -0.16
LINC00539-204ENST00000608957 GCC1Q96CN9 775 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 KCNH4Q9UQ05 1017 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
LINC00539-204ENST00000608957 BAZ2AQ9UIF9 1905 aaKnown RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 IDH1O75874 414 aaKnown RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 MAP4K4O95819 1239 aaPredicted RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 CYP7A1P22680 504 aa14.03□□□□□ -0.16
LINC00539-204ENST00000608957 SNAPC2Q13487 334 aa14.03□□□□□ -0.16
LINC00539-204ENST00000608957 CCDC84Q86UT8 332 aaPredicted RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 CLASRPQ8N2M8 674 aaKnown RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 EDC3Q96F86 508 aaKnown RBP14.03□□□□□ -0.16
LINC00539-204ENST00000608957 FLT1P17948 1338 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 TBC1D12O60347 775 aa14.02□□□□□ -0.17
LINC00539-204ENST00000608957 CETPP11597 493 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms