RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TRIM27P14373 513 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 CTGFP29279 349 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 BTDP43251 543 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 PSMC4P43686 418 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 MECOMQ03112 1051 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 GPAT2Q6NUI2 795 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 DDX4Q9NQI0 724 aaKnown RBP16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 ZHX2Q9Y6X8 837 aa16.55■□□□□ 0.24
POLR2J3-219ENST00000608621 RBBP6Q7Z6E9 1792 aaKnown RBP16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 ATRNL1Q5VV63 1379 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 PRMT2P55345 433 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 PICALMQ13492 652 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 SCYL3Q8IZE3 742 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
POLR2J3-219ENST00000608621 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 ADGRA2Q96PE1 1338 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 GPR75-ASB3A0A0A6YYF3 556 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 PTPRAP18433 802 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 HOXD10P28358 340 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 CENPFP49454 3210 aa16.53■□□□□ 0.24
POLR2J3-219ENST00000608621 LDHCP07864 332 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 CYP2C8P10632 490 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 OSBPP22059 807 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 RHBDL3P58872 404 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 FASTKD5Q7L8L6 764 aaKnown RBP16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 SPATA5Q8NB90 893 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 GCC1Q96CN9 775 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
POLR2J3-219ENST00000608621 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 A0A0G2JLL6 359 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 CTNND1O60716 968 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 PRRT2Q7Z6L0 340 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 NSUN4Q96CB9 384 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 PARK7Q99497 189 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 RAI14Q9P0K7 980 aa16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 PCDH10Q9P2E7 1040 aa16.51■□□□□ 0.23
POLR2J3-219ENST00000608621 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 BCRP11274 1271 aa16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 GSTO1P78417 241 aa16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 MTFR1Q15390 333 aa16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 RAET1EQ8TD07 263 aa16.5■□□□□ 0.23
POLR2J3-219ENST00000608621 TBC1D12O60347 775 aa16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 GRK4P32298 578 aa16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 MCAMP43121 646 aa16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-219ENST00000608621 MYPNQ86TC9 1320 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 TRIM75PA6NK02 468 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 FCGRTP55899 365 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 MKI67P46013 3256 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-219ENST00000608621 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
POLR2J3-219ENST00000608621 HABP4Q5JVS0 413 aaKnown RBP16.47■□□□□ 0.23
POLR2J3-219ENST00000608621 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
POLR2J3-219ENST00000608621 BIN2Q9UBW5 565 aaPredicted RBP16.47■□□□□ 0.23
POLR2J3-219ENST00000608621 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
POLR2J3-219ENST00000608621 SLC45A1Q9Y2W3 748 aa16.47■□□□□ 0.23
POLR2J3-219ENST00000608621 PRKCZQ05513 592 aa16.46■□□□□ 0.23
POLR2J3-219ENST00000608621 POLA2Q14181 598 aa16.46■□□□□ 0.23
POLR2J3-219ENST00000608621 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
POLR2J3-219ENST00000608621 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
POLR2J3-219ENST00000608621 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
POLR2J3-219ENST00000608621 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 CCL5P13501 91 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 SPP2Q13103 211 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
POLR2J3-219ENST00000608621 DOCK1Q14185 1865 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 CAP2P40123 477 aa16.44■□□□□ 0.22
POLR2J3-219ENST00000608621 UBXN2AP68543 259 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms