RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	PDE4D	Q08499	809 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCDC122	Q5T0U0	273 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	ATRIP	Q8WXE1	791 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	LPIN2	Q92539	896 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	KCNJ14	Q9UNX9	436 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	COMMD10	Q9Y6G5	202 aa		13.61	□□□□□ -0.23
PTPN23-206	ENST00000602307	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	BACH1	O14867	736 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	TXK	P42681	527 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	MRPL12	P52815	198 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	GIMAP7	Q8NHV1	300 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	IFT81	Q8WYA0	676 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	CROCC2	H7BZ55	1655 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	PLA2R1	Q13018	1463 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	ERCC3	P19447	782 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	SPECC1L	Q69YQ0	1117 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	CNGA4	Q8IV77	575 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	IGSF22	Q8N9C0	903 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	CLSTN2	Q9H4D0	955 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	RSPH14	Q9UHP6	348 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	PRDM15	P57071	1507 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	NEURL1B	A8MQ27	555 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	CHMP2A	O43633	222 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	GRIPAP1	Q4V328	841 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	DNAJC21	Q5F1R6	531 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	KRT40	Q6A162	431 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	STAM	Q92783	540 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	RBM17	Q96I25	401 aa	Known RBP	13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	CBX8	Q9HC52	389 aa		13.6	□□□□□ -0.23
PTPN23-206	ENST00000602307	ZNF202	O95125	648 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	GPIHBP1	Q8IV16	184 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	NOC4L	Q9BVI4	516 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	CLEC11A	Q9Y240	323 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	UGGT1	Q9NYU2	1555 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCNT1	O60563	726 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	SPATA5	Q8NB90	893 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	TTC16	Q8NEE8	873 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	LMBR1	Q8WVP7	490 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCDC94	Q9BW85	323 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	TUBB4A	P04350	444 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	ZYX	Q15942	572 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	TMEM87A	Q8NBN3	555 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	PPP1R14C	Q8TAE6	165 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	EAF2	Q96CJ1	260 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	GIGYF1	O75420	1035 aa	Predicted RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	PLCD1	P51178	756 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	TRMT2A	Q8IZ69	625 aa	Known RBP	13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	TSC1	Q92574	1164 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCDC87	Q9NVE4	849 aa		13.59	□□□□□ -0.23
PTPN23-206	ENST00000602307	SMIM23	A6NLE4	172 aa		13.58	□□□□□ -0.23
PTPN23-206	ENST00000602307	ME3	Q16798	604 aa		13.58	□□□□□ -0.23
PTPN23-206	ENST00000602307	GSTA5	Q7RTV2	222 aa		13.58	□□□□□ -0.23
PTPN23-206	ENST00000602307	CCDC65	Q8IXS2	484 aa		13.58	□□□□□ -0.23
PTPN23-206	ENST00000602307	SEC62	Q99442	399 aa	Known RBP	13.58	□□□□□ -0.23
PTPN23-206	ENST00000602307	BCORL1	Q5H9F3	1711 aa		13.58	□□□□□ -0.23
PTPN23-206	ENST00000602307	TLDC2	A0PJX2	215 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	PLEKHG3	A1L390	1219 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307		E7EWF7	191 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	FANCC	Q00597	558 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	FAM98C	Q17RN3	349 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	TTC38	Q5R3I4	469 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	CCDC50	Q8IVM0	306 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	PTH1R	Q03431	593 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	TICAM2	Q86XR7	235 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	SYNM	O15061	1565 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	ERCC6L2	Q5T890	1561 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	PRPH	P41219	470 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	FERMT1	Q9BQL6	677 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	RASAL2	Q9UJF2	1139 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	GGA1	Q9UJY5	639 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307	PALD1	Q9ULE6	856 aa		13.58	□□□□□ -0.24
PTPN23-206	ENST00000602307		A0A0D9SFI3	127 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	ATP5J	P18859	108 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	LTK	P29376	864 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	NF2	P35240	595 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	MAPKAPK5	Q8IW41	473 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	CAPN2	P17655	700 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	CSGALNACT2	Q8N6G5	542 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	SSH3	Q8TE77	659 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	VTI1A	Q96AJ9	217 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	ABCC4	O15439	1325 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	CUTA	O60888	179 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	CD2BP2	O95400	341 aa	Known RBP	13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	HARS	P12081	509 aa	Known RBP	13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	RPL13	P26373	211 aa	Known RBP	13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	FAM47A	Q5JRC9	791 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	ERVK-7	P63135	1459 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	LMTK3	Q96Q04	1460 aa		13.57	□□□□□ -0.24
PTPN23-206	ENST00000602307	RIOK3	O14730	519 aa	Known RBP	13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	BRD1	O95696	1058 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	TTLL7	Q6ZT98	887 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	CCDC25	Q86WR0	208 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	RNASE9	P60153	205 aa	Known RBP	13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	CMTR1	Q8N1G2	835 aa	Known RBP	13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	VPS54	Q9P1Q0	977 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	ATP6V0A2	Q9Y487	856 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	NFE2L3	Q9Y4A8	694 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	IQGAP3	Q86VI3	1631 aa		13.56	□□□□□ -0.24
PTPN23-206	ENST00000602307	PLXNC1	O60486	1568 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms