RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SMCR8Q8TEV9 937 aaPredicted RBP22.37■■□□□ 1.17
SSBP4-207ENST00000600244 RAPGEFL1Q9UHV5 662 aa22.37■■□□□ 1.17
SSBP4-207ENST00000600244 SUGT1Q9Y2Z0 365 aa22.37■■□□□ 1.17
SSBP4-207ENST00000600244 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
SSBP4-207ENST00000600244 PTPRAP18433 802 aa22.36■■□□□ 1.17
SSBP4-207ENST00000600244 FAM110CQ1W6H9 321 aa22.36■■□□□ 1.17
SSBP4-207ENST00000600244 TAF7LQ5H9L4 462 aa22.36■■□□□ 1.17
SSBP4-207ENST00000600244 SEMA6BQ9H3T3 888 aa22.36■■□□□ 1.17
SSBP4-207ENST00000600244 TCP10Q12799 353 aa22.35■■□□□ 1.17
SSBP4-207ENST00000600244 LRRC26Q2I0M4 334 aa22.35■■□□□ 1.17
SSBP4-207ENST00000600244 MAP3K21Q5TCX8 1036 aa22.35■■□□□ 1.17
SSBP4-207ENST00000600244 MUC3AQ02505 3323 aa22.34■■□□□ 1.17
SSBP4-207ENST00000600244 MAST3O60307 1309 aa22.34■■□□□ 1.17
SSBP4-207ENST00000600244 NFIAQ12857 509 aa22.34■■□□□ 1.17
SSBP4-207ENST00000600244 FLIIQ13045 1269 aa22.34■■□□□ 1.17
SSBP4-207ENST00000600244 WDR43Q15061 677 aaKnown RBP eCLIP22.34■■□□□ 1.17
SSBP4-207ENST00000600244 SCYL3Q8IZE3 742 aa22.34■■□□□ 1.17
SSBP4-207ENST00000600244 PUS3Q9BZE2 481 aaKnown RBP22.34■■□□□ 1.17
SSBP4-207ENST00000600244 VPS37DQ86XT2 251 aa22.33■■□□□ 1.17
SSBP4-207ENST00000600244 ATRNL1Q5VV63 1379 aa22.33■■□□□ 1.17
SSBP4-207ENST00000600244 PLA2G5P39877 138 aa22.32■■□□□ 1.16
SSBP4-207ENST00000600244 CDC42EP5Q6NZY7 148 aa22.32■■□□□ 1.16
SSBP4-207ENST00000600244 TRIB2Q92519 343 aa22.32■■□□□ 1.16
SSBP4-207ENST00000600244 PICK1Q9NRD5 415 aa22.32■■□□□ 1.16
SSBP4-207ENST00000600244 FAM198AQ9UFP1 575 aa22.32■■□□□ 1.16
SSBP4-207ENST00000600244 AGTPBP1Q9UPW5 1226 aa22.32■■□□□ 1.16
SSBP4-207ENST00000600244 PTPRFP10586 1907 aa22.31■■□□□ 1.16
SSBP4-207ENST00000600244 TNFRSF10AO00220 468 aa22.31■■□□□ 1.16
SSBP4-207ENST00000600244 APAF1O14727 1248 aa22.31■■□□□ 1.16
SSBP4-207ENST00000600244 FRAT2O75474 233 aaPredicted RBP22.31■■□□□ 1.16
SSBP4-207ENST00000600244 ZFPM1Q8IX07 1006 aa22.31■■□□□ 1.16
SSBP4-207ENST00000600244 MYLIPQ8WY64 445 aa22.31■■□□□ 1.16
SSBP4-207ENST00000600244 AK9Q5TCS8 1911 aa22.3■■□□□ 1.16
SSBP4-207ENST00000600244 MAP3K10Q02779 954 aa22.3■■□□□ 1.16
SSBP4-207ENST00000600244 FKBP5Q13451 457 aaPredicted RBP22.3■■□□□ 1.16
SSBP4-207ENST00000600244 CAVIN4Q5BKX8 364 aa22.29■■□□□ 1.16
SSBP4-207ENST00000600244 LBHD1Q9BQE6 289 aaPredicted RBP22.29■■□□□ 1.16
SSBP4-207ENST00000600244 TTYH1Q9H313 450 aaPredicted RBP22.29■■□□□ 1.16
SSBP4-207ENST00000600244 DAGLAQ9Y4D2 1042 aa22.29■■□□□ 1.16
SSBP4-207ENST00000600244 TREML2Q5T2D2 321 aa22.28■■□□□ 1.16
SSBP4-207ENST00000600244 BEND3Q5T5X7 828 aa22.28■■□□□ 1.16
SSBP4-207ENST00000600244 LHX8Q68G74 356 aa22.28■■□□□ 1.16
SSBP4-207ENST00000600244 MROH5Q6ZUA9 1318 aa22.28■■□□□ 1.16
SSBP4-207ENST00000600244 PLXNB2O15031 1838 aa22.27■■□□□ 1.16
SSBP4-207ENST00000600244 PRKAR2AP13861 404 aaKnown RBP22.27■■□□□ 1.16
SSBP4-207ENST00000600244 GCLCP48506 637 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-207ENST00000600244 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
SSBP4-207ENST00000600244 TJAP1Q5JTD0 557 aa22.27■■□□□ 1.16
SSBP4-207ENST00000600244 TSR2Q969E8 191 aaKnown RBP22.27■■□□□ 1.16
SSBP4-207ENST00000600244 PNMA3Q9UL41 463 aa22.27■■□□□ 1.16
SSBP4-207ENST00000600244 MYBBP1AQ9BQG0 1328 aaKnown RBP22.27■■□□□ 1.16
SSBP4-207ENST00000600244 PHIPQ8WWQ0 1821 aa22.27■■□□□ 1.15
SSBP4-207ENST00000600244 TRIM75PA6NK02 468 aa22.26■■□□□ 1.15
SSBP4-207ENST00000600244 GRM8O00222 908 aa22.25■■□□□ 1.15
SSBP4-207ENST00000600244 CTNND1O60716 968 aaKnown RBP22.25■■□□□ 1.15
SSBP4-207ENST00000600244 XRCC5P13010 732 aaKnown RBP22.24■■□□□ 1.15
SSBP4-207ENST00000600244 FOSL2P15408 326 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 CYP2B6P20813 491 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 SHHQ15465 462 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 DIXDC1Q155Q3 683 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 VGLL2Q8N8G2 317 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 FAM122AQ96E09 287 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 SPINK5Q9NQ38 1064 aaPredicted RBP22.24■■□□□ 1.15
SSBP4-207ENST00000600244 USP40Q9NVE5 1235 aa22.24■■□□□ 1.15
SSBP4-207ENST00000600244 CDH23Q9H251 3354 aa22.23■■□□□ 1.15
SSBP4-207ENST00000600244 HOXD11P31277 338 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-207ENST00000600244 SMAD3P84022 425 aaKnown RBP22.23■■□□□ 1.15
SSBP4-207ENST00000600244 CACNB2Q08289 660 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-207ENST00000600244 SH3BP5LQ7L8J4 393 aa22.23■■□□□ 1.15
SSBP4-207ENST00000600244 CCDC84Q86UT8 332 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-207ENST00000600244 PROCA1Q8NCQ7 364 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-207ENST00000600244 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-207ENST00000600244 F6X3S4 739 aa22.22■■□□□ 1.15
SSBP4-207ENST00000600244 PDE8BO95263 885 aa22.22■■□□□ 1.15
SSBP4-207ENST00000600244 SLURP2P0DP57 97 aa22.22■■□□□ 1.15
SSBP4-207ENST00000600244 WDR66Q8TBY9 1149 aa22.22■■□□□ 1.15
SSBP4-207ENST00000600244 KAZALD1Q96I82 304 aa22.22■■□□□ 1.15
SSBP4-207ENST00000600244 MORF4L1Q9UBU8 362 aa22.22■■□□□ 1.15
SSBP4-207ENST00000600244 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
SSBP4-207ENST00000600244 LRRC24Q50LG9 513 aa22.21■■□□□ 1.15
SSBP4-207ENST00000600244 C9orf50Q5SZB4 431 aa22.21■■□□□ 1.15
SSBP4-207ENST00000600244 DNAH12Q6ZR08 3092 aa22.21■■□□□ 1.15
SSBP4-207ENST00000600244 ENTPD3O75355 529 aa22.2■■□□□ 1.14
SSBP4-207ENST00000600244 CCND3P30281 292 aaPredicted RBP22.2■■□□□ 1.14
SSBP4-207ENST00000600244 TRMT44Q8IYL2 757 aaKnown RBP22.2■■□□□ 1.14
SSBP4-207ENST00000600244 IDI2Q9BXS1 227 aa22.2■■□□□ 1.14
SSBP4-207ENST00000600244 ASCC2Q9H1I8 757 aaPredicted RBP22.2■■□□□ 1.14
SSBP4-207ENST00000600244 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
SSBP4-207ENST00000600244 RGS3P49796 1198 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 USP38Q8NB14 1042 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 USP6NLQ92738 828 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 NUDT12Q9BQG2 462 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 SENP6Q9GZR1 1112 aaPredicted RBP22.19■■□□□ 1.14
SSBP4-207ENST00000600244 MAST2Q6P0Q8 1798 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 DOCK2Q92608 1830 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 DOCK1Q14185 1865 aa22.19■■□□□ 1.14
SSBP4-207ENST00000600244 FGFR2P21802 821 aa22.18■■□□□ 1.14
SSBP4-207ENST00000600244 SOCS4Q8WXH5 440 aa22.18■■□□□ 1.14
SSBP4-207ENST00000600244 LTBP2Q14767 1821 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms