RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
IRF3-223ENST00000599223 ARHGAP45Q92619 1136 aa18.2■□□□□ 0.5
IRF3-223ENST00000599223 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
IRF3-223ENST00000599223 ABCF2Q9UG63 623 aa18.2■□□□□ 0.5
IRF3-223ENST00000599223 MROH7-TTC4A0A0A0MT08 1334 aa18.2■□□□□ 0.5
IRF3-223ENST00000599223 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
IRF3-223ENST00000599223 ENTPD3O75355 529 aa18.19■□□□□ 0.5
IRF3-223ENST00000599223 BTDP43251 543 aa18.19■□□□□ 0.5
IRF3-223ENST00000599223 GPAT2Q6NUI2 795 aa18.19■□□□□ 0.5
IRF3-223ENST00000599223 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
IRF3-223ENST00000599223 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 BCAR3O75815 825 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 GNAI3P08754 354 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 CYP2C8P10632 490 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 RHBDL3P58872 404 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 MECOMQ03112 1051 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 PICALMQ13492 652 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 ARHGEF6Q15052 776 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 CCDC84Q86UT8 332 aaPredicted RBP18.18■□□□□ 0.5
IRF3-223ENST00000599223 SCYL3Q8IZE3 742 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
IRF3-223ENST00000599223 FOCADQ5VW36 1801 aa18.17■□□□□ 0.5
IRF3-223ENST00000599223 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
IRF3-223ENST00000599223 KIF22Q14807 665 aa18.17■□□□□ 0.5
IRF3-223ENST00000599223 FAM163AQ96GL9 167 aaPredicted RBP18.17■□□□□ 0.5
IRF3-223ENST00000599223 TMEM106CQ9BVX2 250 aa18.17■□□□□ 0.5
IRF3-223ENST00000599223 HMG20BQ9P0W2 317 aa18.17■□□□□ 0.5
IRF3-223ENST00000599223 A0A0G2JLL6 359 aaPredicted RBP18.16■□□□□ 0.5
IRF3-223ENST00000599223 FAM196BA6NMK8 535 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 BCRP11274 1271 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 PTPRAP18433 802 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 OSBPP22059 807 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 PSMC4P43686 418 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 PRRT2Q7Z6L0 340 aaPredicted RBP18.16■□□□□ 0.5
IRF3-223ENST00000599223 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
IRF3-223ENST00000599223 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 SHISA4Q96DD7 197 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 ZHX2Q9Y6X8 837 aa18.16■□□□□ 0.5
IRF3-223ENST00000599223 GPR75-ASB3A0A0A6YYF3 556 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 GNRH1P01148 92 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 MTFR1Q15390 333 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 ATF7IPQ6VMQ6 1270 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 MIER1Q8N108 512 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 PARK7Q99497 189 aaKnown RBP18.15■□□□□ 0.5
IRF3-223ENST00000599223 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 AFG3L2Q9Y4W6 797 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 DOCK3Q8IZD9 2030 aa18.15■□□□□ 0.5
IRF3-223ENST00000599223 COL2A1P02458 1487 aaPredicted RBP18.14■□□□□ 0.5
IRF3-223ENST00000599223 CXCL11O14625 94 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 ARID4AP29374 1257 aaPredicted RBP18.14■□□□□ 0.49
IRF3-223ENST00000599223 MCAMP43121 646 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 ERICH6Q7L0X2 663 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 SPATA5Q8NB90 893 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 FRAT1Q92837 279 aaPredicted RBP18.14■□□□□ 0.49
IRF3-223ENST00000599223 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 PICK1Q9NRD5 415 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 MYPNQ86TC9 1320 aa18.14■□□□□ 0.49
IRF3-223ENST00000599223 RANBP2P49792 3224 aaKnown RBP18.13■□□□□ 0.49
IRF3-223ENST00000599223 GNAI2P04899 355 aa18.13■□□□□ 0.49
IRF3-223ENST00000599223 PRMT2P55345 433 aa18.13■□□□□ 0.49
IRF3-223ENST00000599223 PRKCZQ05513 592 aa18.13■□□□□ 0.49
IRF3-223ENST00000599223 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
IRF3-223ENST00000599223 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
IRF3-223ENST00000599223 NSUN4Q96CB9 384 aaKnown RBP18.13■□□□□ 0.49
IRF3-223ENST00000599223 TRIM75PA6NK02 468 aa18.12■□□□□ 0.49
IRF3-223ENST00000599223 FMNL1O95466 1100 aaPredicted RBP18.12■□□□□ 0.49
IRF3-223ENST00000599223 HABP4Q5JVS0 413 aaKnown RBP18.12■□□□□ 0.49
IRF3-223ENST00000599223 GADL1Q6ZQY3 521 aa18.12■□□□□ 0.49
IRF3-223ENST00000599223 SLF2Q8IX21 1173 aa18.12■□□□□ 0.49
IRF3-223ENST00000599223 TRIOBPQ9H2D6 2365 aa18.11■□□□□ 0.49
IRF3-223ENST00000599223 RRP1BQ14684 758 aaKnown RBP18.11■□□□□ 0.49
IRF3-223ENST00000599223 GABRQQ9UN88 632 aa18.11■□□□□ 0.49
IRF3-223ENST00000599223 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
IRF3-223ENST00000599223 CTNND1O60716 968 aaKnown RBP18.1■□□□□ 0.49
IRF3-223ENST00000599223 GRK4P32298 578 aa18.1■□□□□ 0.49
IRF3-223ENST00000599223 TREML2Q5T2D2 321 aa18.1■□□□□ 0.49
IRF3-223ENST00000599223 RAET1EQ8TD07 263 aa18.1■□□□□ 0.49
IRF3-223ENST00000599223 GCC1Q96CN9 775 aa18.1■□□□□ 0.49
IRF3-223ENST00000599223 OSBPL5Q9H0X9 879 aaPredicted RBP18.1■□□□□ 0.49
IRF3-223ENST00000599223 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
IRF3-223ENST00000599223 PCDH10Q9P2E7 1040 aa18.1■□□□□ 0.49
IRF3-223ENST00000599223 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
IRF3-223ENST00000599223 FCGRTP55899 365 aa18.09■□□□□ 0.49
IRF3-223ENST00000599223 POLA2Q14181 598 aa18.09■□□□□ 0.49
IRF3-223ENST00000599223 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
IRF3-223ENST00000599223 FASTKD5Q7L8L6 764 aaKnown RBP18.09■□□□□ 0.49
IRF3-223ENST00000599223 RAI14Q9P0K7 980 aa18.09■□□□□ 0.49
IRF3-223ENST00000599223 SZT2Q5T011 3432 aa18.08■□□□□ 0.49
IRF3-223ENST00000599223 TBC1D12O60347 775 aa18.08■□□□□ 0.48
IRF3-223ENST00000599223 ADGRA1Q86SQ6 560 aa18.08■□□□□ 0.48
IRF3-223ENST00000599223 SH3RF3Q8TEJ3 882 aaPredicted RBP18.08■□□□□ 0.48
IRF3-223ENST00000599223 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.48
IRF3-223ENST00000599223 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
IRF3-223ENST00000599223 AGTPBP1Q9UPW5 1226 aa18.08■□□□□ 0.48
IRF3-223ENST00000599223 SLC45A1Q9Y2W3 748 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms