RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 NAP1L1P55209 391 aaKnown RBP14.21□□□□□ -0.14
USHBP1-207ENST00000597928 NLRP12P59046 1061 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 BRAPQ7Z569 592 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 RASGRP4Q8TDF6 673 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 ZHX3Q9H4I2 956 aa14.21□□□□□ -0.14
USHBP1-207ENST00000597928 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 NUP88Q99567 741 aaPredicted RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 SAMSN1Q9NSI8 373 aaKnown RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 CBFA2T2O43439 604 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 NMT2O60551 498 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 SEC31AO94979 1220 aaKnown RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 ADD2P35612 726 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 TERF1P54274 439 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 PUM3Q15397 648 aaKnown RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 CAVIN4Q5BKX8 364 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 RRAGBQ5VZM2 374 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 IQCA1Q86XH1 822 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 EPSTI1Q96J88 318 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 MKNK2Q9HBH9 465 aa14.2□□□□□ -0.14
USHBP1-207ENST00000597928 GNL3LQ9NVN8 582 aaKnown RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 SAP30BPQ9UHR5 308 aaKnown RBP14.2□□□□□ -0.14
USHBP1-207ENST00000597928 MAGEB6P1A0A0J9YX57 407 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 MCM6Q14566 821 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 TSR1Q2NL82 804 aaKnown RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 CATIPQ7Z7H3 387 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 DRC1Q96MC2 740 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 TRIM34Q9BYJ4 488 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 PDE8AO60658 829 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 PCCAP05165 728 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 TMCO3Q6UWJ1 677 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 GIGYF2Q6Y7W6 1299 aaKnown RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 GDAP1L1Q96MZ0 367 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 GPR101Q96P66 508 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 NRXN3Q9Y4C0 1643 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 C3P01024 1663 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 N4BP3O15049 544 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 TRMT1LQ7Z2T5 733 aaKnown RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 IRX2Q9BZI1 471 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 CPVLQ9H3G5 476 aa14.19□□□□□ -0.14
USHBP1-207ENST00000597928 ARGLU1Q9NWB6 273 aaPredicted RBP14.19□□□□□ -0.14
USHBP1-207ENST00000597928 SRCAPQ6ZRS2 3230 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 USP17L21D6R901 530 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 RHOXF2BP0C7M4 288 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 FILIP1LQ4L180 1135 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 AKNAD1Q5T1N1 836 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 LRRN4CLQ8ND94 238 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 RHOXF2Q9BQY4 288 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 EIF6P56537 245 aaKnown RBP14.18□□□□□ -0.14
USHBP1-207ENST00000597928 DZIP1Q86YF9 867 aaKnown RBP14.18□□□□□ -0.14
USHBP1-207ENST00000597928 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
USHBP1-207ENST00000597928 SPTLC3Q9NUV7 552 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 MROH7-TTC4A0A0A0MT08 1334 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 WDR17Q8IZU2 1322 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 TRIM75PA6NK02 468 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 SHC4Q6S5L8 630 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 LPIN2Q92539 896 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 MCM9Q9NXL9 1143 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
USHBP1-207ENST00000597928 MAP3K15Q6ZN16 1313 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 G3V3G9 751 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 SLC39A14Q15043 492 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 ARMCX5Q6P1M9 558 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 GPKOWQ92917 476 aaPredicted RBP eCLIP14.17□□□□□ -0.14
USHBP1-207ENST00000597928 PPP1R13BQ96KQ4 1090 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 UTYO14607 1347 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 CAVIN2O95810 425 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 DDB1Q16531 1140 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.17□□□□□ -0.14
USHBP1-207ENST00000597928 ZNF654Q8IZM8 581 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 CCDC150Q8NCX0 1101 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 ESR2Q92731 530 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 KCNB2Q92953 911 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 MRFAP1L1Q96HT8 127 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 BAG1Q99933 345 aaPredicted RBP14.17□□□□□ -0.14
USHBP1-207ENST00000597928 PLEKHA4Q9H4M7 779 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 NEMFO60524 1076 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 YEATS4O95619 227 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 MATR3P43243 847 aaKnown RBP eCLIP14.17□□□□□ -0.14
USHBP1-207ENST00000597928 POSTNQ15063 836 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 ANKRD18AQ8IVF6 992 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 WASF1Q92558 559 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 CSRNP2Q9H175 543 aa14.17□□□□□ -0.14
USHBP1-207ENST00000597928 TNKSO95271 1327 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 CMA1P23946 247 aa14.16□□□□□ -0.14
USHBP1-207ENST00000597928 TNNT3P45378 269 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms