RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 CENPBP07199 599 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-207ENST00000595631 SLURP2P0DP57 97 aa16.71■□□□□ 0.27
SHKBP1-207ENST00000595631 ADD2P35612 726 aa16.71■□□□□ 0.27
SHKBP1-207ENST00000595631 FKBP1BP68106 108 aa16.71■□□□□ 0.27
SHKBP1-207ENST00000595631 RGMBQ6NW40 437 aa16.71■□□□□ 0.27
SHKBP1-207ENST00000595631 ARMC9Q7Z3E5 817 aa16.71■□□□□ 0.27
SHKBP1-207ENST00000595631 DOCK1Q14185 1865 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 ERC2O15083 957 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 IGSF3O75054 1194 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 ZNF157P51786 506 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 TGFBRAP1Q8WUH2 860 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 HHIPL1Q96JK4 782 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 ZIC5Q96T25 663 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 STAP2Q9UGK3 403 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 MYH8P13535 1937 aa16.7■□□□□ 0.26
SHKBP1-207ENST00000595631 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 FAM155AB1AL88 458 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 PDE4AP27815 886 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 RASAL3Q86YV0 1011 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 MAPKAPK5Q8IW41 473 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 ZSCAN29Q8IWY8 852 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 KBTBD3Q8NAB2 608 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.69■□□□□ 0.262e-8■■■■■ 26.9
SHKBP1-207ENST00000595631 OSBPL5Q9H0X9 879 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 FLT1P17948 1338 aa16.69■□□□□ 0.26
SHKBP1-207ENST00000595631 PLCG2P16885 1265 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 ECE1P42892 770 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 SLC4A8Q2Y0W8 1093 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 PLEKHM2Q8IWE5 1019 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
SHKBP1-207ENST00000595631 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 SLC10A3P09131 477 aa16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 SAP30BPQ9UHR5 308 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-207ENST00000595631 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 MBD4O95243 580 aa16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 FSD1Q9BTV5 496 aa16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 PUS7LQ9H0K6 701 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-207ENST00000595631 NEFLP07196 543 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 USP5P45974 858 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 DCAF15Q66K64 600 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 TMED8Q6PL24 325 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 ZKSCAN4Q969J2 545 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 WRNIP1Q96S55 665 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 ELP3Q9H9T3 547 aa16.65■□□□□ 0.26
SHKBP1-207ENST00000595631 PTPRFP10586 1907 aa16.64■□□□□ 0.26
SHKBP1-207ENST00000595631 RNF113AO15541 343 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 PRKAB2O43741 272 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 INPP5BP32019 993 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 VGLL4Q14135 290 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 ZSCAN25Q6NSZ9 544 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 CCDC102AQ96A19 550 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 SLC10A4Q96EP9 437 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 PALD1Q9ULE6 856 aa16.64■□□□□ 0.25
SHKBP1-207ENST00000595631 M0R2C6 588 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 GJA5P36382 358 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 MAP3K9P80192 1104 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 KIF23Q02241 960 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 EVX2Q03828 476 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 NOGQ13253 232 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 WNK4Q96J92 1243 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 SEC62Q99442 399 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 CRNKL1Q9BZJ0 848 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 SNCAIPQ9Y6H5 919 aa16.63■□□□□ 0.25
SHKBP1-207ENST00000595631 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
SHKBP1-207ENST00000595631 CERS3Q8IU89 383 aa16.62■□□□□ 0.25
SHKBP1-207ENST00000595631 APPBP2Q92624 585 aa16.62■□□□□ 0.25
SHKBP1-207ENST00000595631 EVI5LQ96CN4 794 aa16.62■□□□□ 0.25
SHKBP1-207ENST00000595631 OSBPL3Q9H4L5 887 aa16.62■□□□□ 0.25
SHKBP1-207ENST00000595631 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
SHKBP1-207ENST00000595631 PHF20L1A8MW92 1017 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 HSPA1AP0DMV8 641 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 HSPA1BP0DMV9 641 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 MAP2K2P36507 400 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
SHKBP1-207ENST00000595631 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms