RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 SLC10A4Q96EP9 437 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 EDC3Q96F86 508 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 ELP3Q9H9T3 547 aa13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 SUPT16HQ9Y5B9 1047 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 BAZ2AQ9UIF9 1905 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-206ENST00000595523 IGSF3O75054 1194 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 PPP4CP60510 307 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 MAGEB6Q8N7X4 407 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 RNF186Q9NXI6 227 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 ZNF112Q9UJU3 913 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 SNCAIPQ9Y6H5 919 aa13.39□□□□□ -0.27
SHKBP1-206ENST00000595523 GOLIM4O00461 696 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 CA12O43570 354 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 CYP7A1P22680 504 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 INPP5BP32019 993 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 TM4SF4P48230 202 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 EXOC6Q8TAG9 804 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 HOOK2Q96ED9 719 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 PRDM10Q9NQV6 1147 aa13.38□□□□□ -0.27
SHKBP1-206ENST00000595523 MYH8P13535 1937 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 PHF20L1A8MW92 1017 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 TRPA1O75762 1119 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 TTF1Q15361 905 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 TSHZ3Q63HK5 1081 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 MIGA1Q8NAN2 632 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 OPTNQ96CV9 577 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 HAUS7Q99871 368 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
SHKBP1-206ENST00000595523 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 BAG3O95817 575 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 CHGBP05060 677 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 PDE6AP16499 860 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 CSADQ9Y600 493 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 FLT1P17948 1338 aa13.36□□□□□ -0.27
SHKBP1-206ENST00000595523 MANSC4A6NHS7 340 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 PLCG2P16885 1265 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 SREBF2Q12772 1141 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 AAMPQ13685 434 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 NOL9Q5SY16 702 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 SLC9C2Q5TAH2 1124 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 PTPN18Q99952 460 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 RIOK1Q9BRS2 568 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 SALL3Q9BXA9 1300 aa13.35□□□□□ -0.27
SHKBP1-206ENST00000595523 HTTP42858 3142 aa13.34□□□□□ -0.27
SHKBP1-206ENST00000595523 TESPA1A2RU30 521 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-206ENST00000595523 ERO1BQ86YB8 467 aa13.34□□□□□ -0.27
SHKBP1-206ENST00000595523 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
SHKBP1-206ENST00000595523 ZNF532Q9HCE3 1301 aa13.34□□□□□ -0.27
SHKBP1-206ENST00000595523 LOC285556D6RIA3 1793 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 IRF6O14896 467 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 TBC1D12O60347 775 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 ADD2P35612 726 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 PPIL2Q13356 520 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 PI4K2BQ8TCG2 481 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 GCC1Q96CN9 775 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 R3HDMLQ9H3Y0 253 aa13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-206ENST00000595523 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 IGHDP01880 384 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 INHBEP58166 350 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 IRX6P78412 446 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 PPATQ06203 517 aa13.32□□□□□ -0.28
SHKBP1-206ENST00000595523 ANKRD45Q5TZF3 282 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms