RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 DOCK2Q92608 1830 aa26.89■■□□□ 1.9
DDX39A-215ENST00000590696 PNMA6EA0A0J9YXQ4 647 aa26.89■■□□□ 1.9
DDX39A-215ENST00000590696 ECM2O94769 699 aaPredicted RBP26.89■■□□□ 1.9
DDX39A-215ENST00000590696 MECOMQ03112 1051 aa26.89■■□□□ 1.9
DDX39A-215ENST00000590696 DDX4Q9NQI0 724 aaKnown RBP26.89■■□□□ 1.9
DDX39A-215ENST00000590696 MROH7-TTC4A0A0A0MT08 1334 aa26.89■■□□□ 1.89
DDX39A-215ENST00000590696 DDTLA6NHG4 134 aaPredicted RBP26.88■■□□□ 1.89
DDX39A-215ENST00000590696 GNRH1P01148 92 aa26.88■■□□□ 1.89
DDX39A-215ENST00000590696 PICALMQ13492 652 aa26.88■■□□□ 1.89
DDX39A-215ENST00000590696 GORABQ5T7V8 394 aa26.88■■□□□ 1.89
DDX39A-215ENST00000590696 SCYL3Q8IZE3 742 aa26.88■■□□□ 1.89
DDX39A-215ENST00000590696 HMG20BQ9P0W2 317 aa26.88■■□□□ 1.89
DDX39A-215ENST00000590696 CXCL11O14625 94 aa26.87■■□□□ 1.89
DDX39A-215ENST00000590696 G3BP1Q13283 466 aaKnown RBP eCLIP26.87■■□□□ 1.89
DDX39A-215ENST00000590696 GPR75-ASB3A0A0A6YYF3 556 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 SLURP2P0DP57 97 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 MAP3K10Q02779 954 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 PI16Q6UXB8 463 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 SPATA5Q8NB90 893 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 SH3TC2Q8TF17 1288 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 ZNF384Q8TF68 577 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 PICK1Q9NRD5 415 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 ZHX2Q9Y6X8 837 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 ADGRA2Q96PE1 1338 aa26.86■■□□□ 1.89
DDX39A-215ENST00000590696 MYCP01106 439 aaPredicted RBP26.85■■□□□ 1.89
DDX39A-215ENST00000590696 PTPRAP18433 802 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 CTGFP29279 349 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 PSMC4P43686 418 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 PRMT2P55345 433 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 RHBDL3P58872 404 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 SLC4A8Q2Y0W8 1093 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 GPAT2Q6NUI2 795 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 TBC1D9Q6ZT07 1266 aa26.85■■□□□ 1.89
DDX39A-215ENST00000590696 TMEM57Q8N5G2 664 aa26.84■■□□□ 1.89
DDX39A-215ENST00000590696 MKI67P46013 3256 aaKnown RBP26.84■■□□□ 1.89
DDX39A-215ENST00000590696 KIAA0100Q14667 2235 aaKnown RBP26.84■■□□□ 1.89
DDX39A-215ENST00000590696 LDHCP07864 332 aa26.83■■□□□ 1.89
DDX39A-215ENST00000590696 ARID4AP29374 1257 aaPredicted RBP26.83■■□□□ 1.89
DDX39A-215ENST00000590696 GSTO1P78417 241 aa26.83■■□□□ 1.89
DDX39A-215ENST00000590696 ZKSCAN2Q63HK3 967 aa26.83■■□□□ 1.89
DDX39A-215ENST00000590696 NSUN4Q96CB9 384 aaKnown RBP26.83■■□□□ 1.89
DDX39A-215ENST00000590696 TRIM47Q96LD4 638 aa26.83■■□□□ 1.89
DDX39A-215ENST00000590696 PARK7Q99497 189 aaKnown RBP26.83■■□□□ 1.89
DDX39A-215ENST00000590696 AFG3L2Q9Y4W6 797 aa26.83■■□□□ 1.89
DDX39A-215ENST00000590696 BRCA2P51587 3418 aa26.83■■□□□ 1.89
DDX39A-215ENST00000590696 A0A0G2JLL6 359 aaPredicted RBP26.82■■□□□ 1.88
DDX39A-215ENST00000590696 CTNND1O60716 968 aaKnown RBP26.82■■□□□ 1.88
DDX39A-215ENST00000590696 FMNL1O95466 1100 aaPredicted RBP26.82■■□□□ 1.88
DDX39A-215ENST00000590696 CYP2C8P10632 490 aa26.82■■□□□ 1.88
DDX39A-215ENST00000590696 FASTKD5Q7L8L6 764 aaKnown RBP26.82■■□□□ 1.88
DDX39A-215ENST00000590696 PRRT2Q7Z6L0 340 aaPredicted RBP26.82■■□□□ 1.88
DDX39A-215ENST00000590696 RAI14Q9P0K7 980 aa26.82■■□□□ 1.88
DDX39A-215ENST00000590696 HOXD10P28358 340 aa26.81■■□□□ 1.88
DDX39A-215ENST00000590696 MCAMP43121 646 aa26.81■■□□□ 1.88
DDX39A-215ENST00000590696 SRRDQ9UH36 339 aa26.81■■□□□ 1.88
DDX39A-215ENST00000590696 UQCRFS1P1P0C7P4 283 aa26.8■■□□□ 1.88
DDX39A-215ENST00000590696 OSBPP22059 807 aa26.8■■□□□ 1.88
DDX39A-215ENST00000590696 GADL1Q6ZQY3 521 aa26.8■■□□□ 1.88
DDX39A-215ENST00000590696 NPM3O75607 178 aaKnown RBP26.79■■□□□ 1.88
DDX39A-215ENST00000590696 MAP4K4O95819 1239 aaPredicted RBP26.79■■□□□ 1.88
DDX39A-215ENST00000590696 BCRP11274 1271 aa26.79■■□□□ 1.88
DDX39A-215ENST00000590696 TBC1D12O60347 775 aa26.78■■□□□ 1.88
DDX39A-215ENST00000590696 POLA2Q14181 598 aa26.78■■□□□ 1.88
DDX39A-215ENST00000590696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.78■■□□□ 1.88
DDX39A-215ENST00000590696 LRP2BPQ9P2M1 347 aa26.78■■□□□ 1.88
DDX39A-215ENST00000590696 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.78■■□□□ 1.88
DDX39A-215ENST00000590696 DOCK1Q14185 1865 aa26.78■■□□□ 1.88
DDX39A-215ENST00000590696 MYPNQ86TC9 1320 aa26.77■■□□□ 1.88
DDX39A-215ENST00000590696 FAM196BA6NMK8 535 aa26.77■■□□□ 1.88
DDX39A-215ENST00000590696 CCDC84Q86UT8 332 aaPredicted RBP26.77■■□□□ 1.88
DDX39A-215ENST00000590696 RAET1EQ8TD07 263 aa26.77■■□□□ 1.88
DDX39A-215ENST00000590696 GCC1Q96CN9 775 aa26.77■■□□□ 1.88
DDX39A-215ENST00000590696 TRIM75PA6NK02 468 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 ATP8B2P98198 1209 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 OS9Q13438 667 aaPredicted RBP26.76■■□□□ 1.87
DDX39A-215ENST00000590696 TNNI3KQ59H18 835 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 SSH3Q8TE77 659 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 GPR108Q9NPR9 543 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 SNRKQ9NRH2 765 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 FPGT-TNNI3KV9GXZ4 949 aa26.76■■□□□ 1.87
DDX39A-215ENST00000590696 PHIPQ8WWQ0 1821 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 GRK4P32298 578 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 FCGRTP55899 365 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 HNRNPUQ00839 825 aaKnown RBP eCLIP26.75■■□□□ 1.87
DDX39A-215ENST00000590696 MTFR1Q15390 333 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 TTC39AQ5SRH9 613 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 TEX11Q8IYF3 940 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 OSBPL5Q9H0X9 879 aaPredicted RBP26.75■■□□□ 1.87
DDX39A-215ENST00000590696 SLC45A1Q9Y2W3 748 aa26.75■■□□□ 1.87
DDX39A-215ENST00000590696 CCDC158Q5M9N0 1113 aa26.74■■□□□ 1.87
DDX39A-215ENST00000590696 DBNDD2Q9BQY9 259 aa26.74■■□□□ 1.87
DDX39A-215ENST00000590696 C1orf115Q9H7X2 142 aa26.74■■□□□ 1.87
DDX39A-215ENST00000590696 PTPRFP10586 1907 aa26.73■■□□□ 1.87
DDX39A-215ENST00000590696 SURF6O75683 361 aaKnown RBP26.73■■□□□ 1.87
DDX39A-215ENST00000590696 PRKCZQ05513 592 aa26.73■■□□□ 1.87
DDX39A-215ENST00000590696 SH3RF3Q8TEJ3 882 aaPredicted RBP26.73■■□□□ 1.87
DDX39A-215ENST00000590696 NOL10Q9BSC4 688 aaKnown RBP26.73■■□□□ 1.87
DDX39A-215ENST00000590696 COL2A1P02458 1487 aaPredicted RBP26.73■■□□□ 1.87
DDX39A-215ENST00000590696 NAA16Q6N069 864 aaPredicted RBP26.72■■□□□ 1.87
DDX39A-215ENST00000590696 FTSJ3Q8IY81 847 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms